| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is hipO [H]
Identifier: 83592320
GI number: 83592320
Start: 1170967
End: 1172160
Strand: Direct
Name: hipO [H]
Synonym: Rru_A0984
Alternate gene names: 83592320
Gene position: 1170967-1172160 (Clockwise)
Preceding gene: 83592319
Following gene: 83592321
Centisome position: 26.9
GC content: 66.67
Gene sequence:
>1194_bases ATGTCCGTCATCCCGCAGATCGCCGCCTTCGCCCAGGAGCTTGGCGCCCTTCGCCACGATATCCACGCCCACCCCGAACT GGGCTTCGAGGAAAGGCGTACCGCCGCCCTCGTCGCCGAGAAGCTGGCCGCCTGGGGGATCGAGGTTCACACCGGCATCG GCAAGACCGGCGTGGTGGGGGTGCTCAAGGGCCGCCTGGCCCCCGGCGCGCAAGGGGCGCGGACGATTGGCCTGCGCGCC GATATGGATGCCCTGCCGATGGACGAGGAAAGCGGCTGCGCCTATGCCTCGACCCACGCGGGCCGCTTCCATGGCTGCGG TCATGACGGCCATACCACCATGCTGCTGGGCGCGGCCCGCTATCTGGCCGCTACCCGGGCTTTCGCCGGCACCGTCGTTT TCATCTTTCAGCCGGGTGAGGAAGGCGTTGGCGGCGCCAAGGCCATGCTGGCCGATGGCCTGTTTACGCGCTTTCCCTGC GACGAGCTTTACGCCATGCACAACTGGCCGGCCCAGGCGGCCAATACGGTGATGGTCAAACCCGGCCCGGCGATGGCCGG ATCGGATTTCTTCGATATCCGCATCAAGGGCAAGGGCAGTCACGGGGCGATGCCCCAGTTCTCGCGCGATCCCATCATCG TCGCCACCGCCTTGGTCCAGGCCCTGCAATCGGTGGTCAGCCGCAATGTCGCCCCGACTGGCGCCGCCGTGCTGTCGGTC ACCCAGATCCATTCCGGTTCGGCCTATAACGTCGTGCCCGATGGGGCGGTGATTTCGGGGACCATGCGCTTTTTCGACGC CGCCGTCGGCGATCTGATCCGCCAGCGCATGCGCGCCCTGGCCGCCGGGCTGGCCACCAGCTTTGGCGTCGAGATCACCG TCGATCTGCGGCCGACCTTCACCGTTCTGGTCAATGATCCGGCCCTGTCGCGGGCCCTGGTCGAGGCGGCGGGCGATGTC GTCGGCGGCGATCGGGCGATGATCAAGGAGGATCTGGAGATGGGCAGCGAGGATTTCGCCGACATGCTGCGCGTCGTTCC CGGCGCCTATTGCACCCTGGGCCATTCCACGGCGCCCGAGACCAATAAGCCCCTGCATAATCCGGGGTTCGTTTTCGACG ACGCCATCTTGCCGGTGGGGGCGAGCCTCTACGCCCGCATTGTCGAAAGACGGCTGATTGGACAAACGTCATAG
Upstream 100 bases:
>100_bases CGCTGCTGCGCTTGGCCCATGCCTATGATCTGGCCACCCGCTGGCCCGCCCGGCGGCCGCCGCCGGTTCTTTCCCCCGCG TCTTGAAGGGTTCTCAAACC
Downstream 100 bases:
>100_bases GCGTTACGAAAATAGTGTTCTTTTTTTACGAGTATCTTTGCAGCAACGGCCGCACCTTTATTCATATGGTCTAAAGGCAA GGTTGTTGCCGGGTCCCAAG
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSVIPQIAAFAQELGALRHDIHAHPELGFEERRTAALVAEKLAAWGIEVHTGIGKTGVVGVLKGRLAPGAQGARTIGLRA DMDALPMDEESGCAYASTHAGRFHGCGHDGHTTMLLGAARYLAATRAFAGTVVFIFQPGEEGVGGAKAMLADGLFTRFPC DELYAMHNWPAQAANTVMVKPGPAMAGSDFFDIRIKGKGSHGAMPQFSRDPIIVATALVQALQSVVSRNVAPTGAAVLSV TQIHSGSAYNVVPDGAVISGTMRFFDAAVGDLIRQRMRALAAGLATSFGVEITVDLRPTFTVLVNDPALSRALVEAAGDV VGGDRAMIKEDLEMGSEDFADMLRVVPGAYCTLGHSTAPETNKPLHNPGFVFDDAILPVGASLYARIVERRLIGQTS
Sequences:
>Translated_397_residues MSVIPQIAAFAQELGALRHDIHAHPELGFEERRTAALVAEKLAAWGIEVHTGIGKTGVVGVLKGRLAPGAQGARTIGLRA DMDALPMDEESGCAYASTHAGRFHGCGHDGHTTMLLGAARYLAATRAFAGTVVFIFQPGEEGVGGAKAMLADGLFTRFPC DELYAMHNWPAQAANTVMVKPGPAMAGSDFFDIRIKGKGSHGAMPQFSRDPIIVATALVQALQSVVSRNVAPTGAAVLSV TQIHSGSAYNVVPDGAVISGTMRFFDAAVGDLIRQRMRALAAGLATSFGVEITVDLRPTFTVLVNDPALSRALVEAAGDV VGGDRAMIKEDLEMGSEDFADMLRVVPGAYCTLGHSTAPETNKPLHNPGFVFDDAILPVGASLYARIVERRLIGQTS >Mature_396_residues SVIPQIAAFAQELGALRHDIHAHPELGFEERRTAALVAEKLAAWGIEVHTGIGKTGVVGVLKGRLAPGAQGARTIGLRAD MDALPMDEESGCAYASTHAGRFHGCGHDGHTTMLLGAARYLAATRAFAGTVVFIFQPGEEGVGGAKAMLADGLFTRFPCD ELYAMHNWPAQAANTVMVKPGPAMAGSDFFDIRIKGKGSHGAMPQFSRDPIIVATALVQALQSVVSRNVAPTGAAVLSVT QIHSGSAYNVVPDGAVISGTMRFFDAAVGDLIRQRMRALAAGLATSFGVEITVDLRPTFTVLVNDPALSRALVEAAGDVV GGDRAMIKEDLEMGSEDFADMLRVVPGAYCTLGHSTAPETNKPLHNPGFVFDDAILPVGASLYARIVERRLIGQTS
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=434, Percent_Identity=28.110599078341, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41698; Mature: 41567
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIPQIAAFAQELGALRHDIHAHPELGFEERRTAALVAEKLAAWGIEVHTGIGKTGVVG CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH VLKGRLAPGAQGARTIGLRADMDALPMDEESGCAYASTHAGRFHGCGHDGHTTMLLGAAR HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH YLAATRAFAGTVVFIFQPGEEGVGGAKAMLADGLFTRFPCDELYAMHNWPAQAANTVMVK HHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCHHCCCHHHHHHHCCCCHHHCCEEEEC PGPAMAGSDFFDIRIKGKGSHGAMPQFSRDPIIVATALVQALQSVVSRNVAPTGAAVLSV CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEE TQIHSGSAYNVVPDGAVISGTMRFFDAAVGDLIRQRMRALAAGLATSFGVEITVDLRPTF EEECCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEE TVLVNDPALSRALVEAAGDVVGGDRAMIKEDLEMGSEDFADMLRVVPGAYCTLGHSTAPE EEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCC TNKPLHNPGFVFDDAILPVGASLYARIVERRLIGQTS CCCCCCCCCCEECCCHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVIPQIAAFAQELGALRHDIHAHPELGFEERRTAALVAEKLAAWGIEVHTGIGKTGVVG CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH VLKGRLAPGAQGARTIGLRADMDALPMDEESGCAYASTHAGRFHGCGHDGHTTMLLGAAR HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH YLAATRAFAGTVVFIFQPGEEGVGGAKAMLADGLFTRFPCDELYAMHNWPAQAANTVMVK HHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCHHCCCHHHHHHHCCCCHHHCCEEEEC PGPAMAGSDFFDIRIKGKGSHGAMPQFSRDPIIVATALVQALQSVVSRNVAPTGAAVLSV CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEE TQIHSGSAYNVVPDGAVISGTMRFFDAAVGDLIRQRMRALAAGLATSFGVEITVDLRPTF EEECCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEE TVLVNDPALSRALVEAAGDVVGGDRAMIKEDLEMGSEDFADMLRVVPGAYCTLGHSTAPE EEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCC TNKPLHNPGFVFDDAILPVGASLYARIVERRLIGQTS CCCCCCCCCCEECCCHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]