| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591936
Identifier: 83591936
GI number: 83591936
Start: 709725
End: 710399
Strand: Direct
Name: 83591936
Synonym: Rru_A0597
Alternate gene names: NA
Gene position: 709725-710399 (Clockwise)
Preceding gene: 83591935
Following gene: 83591937
Centisome position: 16.3
GC content: 55.7
Gene sequence:
>675_bases ATGAGTGAGCAAATCCTGGCTATCAAAGCCTCGTTGTCGGCTGCGCGCCTGAGCACCTACGAGGCTGCCGCGAACACGCG GGGCGACGATGATTCGTCAGCTCTCGACCTCTACCTATGGAACGCGCAAGTTTCCGGCGGATTCCTCGCGCCGTTGCATA TCTGCGAGGTCGTCGTACGCAACGCCGTCGCGGATGCGATAGAGGCCAAATATGGGAGCCGATGGCCGTGGTCGCCAGGT TTTGAGCAAAGTCTCCCTTCGCCATCGGTCGCCTATAGTCCTCGCCAAGATCTTTTCAACGCTCGCCGTAATGCGCACAC GGTGGGAAAAGTCATTCCTGAGCTGAAATTTGTCTTTTGGCAGCGCATGTTCACCAGTCGTCACGATGCGCGTGTTTGGG ATCCCCATCTCTTGCGTGTCCTACCGGGCTTGGATCCTTCGAAATCGGTCAGTGACCTGCGAAAAGCTATTTATGATGAT CTTGAAGAAATCCGGACGCTCCGTAACCGGATTGCACATCATGAGCCGATCTTCACGAGATCCCTTAAGGACGATTTTCA GAGGATAATGAACCTAATCGATTATCGCTCGCGGCTGACCGCCAACTGGGTCAGGGCGAATCATCAGGTTCACGTGCTGG ACATGCTGCAACGCAAGCCAGCCCCCACCCCGTGA
Upstream 100 bases:
>100_bases GGGCTTTTCATTCAACGATCGTCTGTCCTCGGGGGGAGGCTCGCGCCAACAAAGCCCAAGGCTCATCTTGTGAAGATAGG TTTCTTTAGGGGGGGCGTCA
Downstream 100 bases:
>100_bases CGTCAGGCTTCGCCGAGCCGATGCCCGTCAGGCCACTCCCATCCTTCTCCAGCCCCCCAGATCCTCACCGCAGGGTATTC CGCCAGACCCCAAAACCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSEQILAIKASLSAARLSTYEAAANTRGDDDSSALDLYLWNAQVSGGFLAPLHICEVVVRNAVADAIEAKYGSRWPWSPG FEQSLPSPSVAYSPRQDLFNARRNAHTVGKVIPELKFVFWQRMFTSRHDARVWDPHLLRVLPGLDPSKSVSDLRKAIYDD LEEIRTLRNRIAHHEPIFTRSLKDDFQRIMNLIDYRSRLTANWVRANHQVHVLDMLQRKPAPTP
Sequences:
>Translated_224_residues MSEQILAIKASLSAARLSTYEAAANTRGDDDSSALDLYLWNAQVSGGFLAPLHICEVVVRNAVADAIEAKYGSRWPWSPG FEQSLPSPSVAYSPRQDLFNARRNAHTVGKVIPELKFVFWQRMFTSRHDARVWDPHLLRVLPGLDPSKSVSDLRKAIYDD LEEIRTLRNRIAHHEPIFTRSLKDDFQRIMNLIDYRSRLTANWVRANHQVHVLDMLQRKPAPTP >Mature_223_residues SEQILAIKASLSAARLSTYEAAANTRGDDDSSALDLYLWNAQVSGGFLAPLHICEVVVRNAVADAIEAKYGSRWPWSPGF EQSLPSPSVAYSPRQDLFNARRNAHTVGKVIPELKFVFWQRMFTSRHDARVWDPHLLRVLPGLDPSKSVSDLRKAIYDDL EEIRTLRNRIAHHEPIFTRSLKDDFQRIMNLIDYRSRLTANWVRANHQVHVLDMLQRKPAPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25569; Mature: 25438
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQILAIKASLSAARLSTYEAAANTRGDDDSSALDLYLWNAQVSGGFLAPLHICEVVVR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH NAVADAIEAKYGSRWPWSPGFEQSLPSPSVAYSPRQDLFNARRNAHTVGKVIPELKFVFW HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRMFTSRHDARVWDPHLLRVLPGLDPSKSVSDLRKAIYDDLEEIRTLRNRIAHHEPIFTR HHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SLKDDFQRIMNLIDYRSRLTANWVRANHQVHVLDMLQRKPAPTP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SEQILAIKASLSAARLSTYEAAANTRGDDDSSALDLYLWNAQVSGGFLAPLHICEVVVR CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH NAVADAIEAKYGSRWPWSPGFEQSLPSPSVAYSPRQDLFNARRNAHTVGKVIPELKFVFW HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRMFTSRHDARVWDPHLLRVLPGLDPSKSVSDLRKAIYDDLEEIRTLRNRIAHHEPIFTR HHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH SLKDDFQRIMNLIDYRSRLTANWVRANHQVHVLDMLQRKPAPTP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA