| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is sphX [H]
Identifier: 83591937
GI number: 83591937
Start: 710794
End: 711822
Strand: Direct
Name: sphX [H]
Synonym: Rru_A0598
Alternate gene names: 83591937
Gene position: 710794-711822 (Clockwise)
Preceding gene: 83591936
Following gene: 83591938
Centisome position: 16.33
GC content: 62.39
Gene sequence:
>1029_bases TTGATCAGGAAGACCATCGCTCTGGCCGCCTTCGCGGCCGTCGCCGTCGCCGGCGCCGCCGAGGCCCGCGACCAGATCCG CATCGTCGGGTCCTCCACGGTCTATCCCTTCGCCACCACCGTGGCCGAGAATTTCGGTAAGACCTCGTCGTTCAAGACCC CGGTGATCGAGTCCACCGGTTCGGGCGGCGGTCTCAAGCTGTTTTGCGCCGGCGTCGGTGTCGAGCATCCCGATATCGCC AATGCCTCGCGTCGCATCAAGAAGTCGGAAGTCGAGACCTGCGCCAAGAACGGCGTGAAGGAAATCACCGAAGTTCAGAT CGGCTTCGATGGCATCGTTCTGGCCAACACCAAGACCGCCCCGGCCTTCAATCTGACCAAGGGTCAGATCTTCCAGGCCC TGGCCAAGGAAGTTCCGGTCGACGGCAAGTGGGTCGCCAATCCCTATTCCAACTGGTCGCAGATCGACGCCAAGCTGCCG AACGAGGAGATCGAGGTTCTCGGTCCGCCGCCGACCTCGGGCACCCGTGACGCCTTCGTCGAGCTGGTGATGGAAACCGG TTGCCTTGAACTGCCCGCTTGCGCCGACCTCAAGAAGGCCGACGAGAAGAAGTTCTCCTCGGTGTTCGCGTCGTTGCGTG AAGACGGCCGCTTCATCGAAGCCGGCGAGAACGACAACCTGATCGTTCAGAAGCTGCAGAGCAACCCGACCGCTCTGGGC ATCTTCGGCTTCTCCTTCCTCGACCAGAACAGCGACAAGATCCAGGGCTCGCACATCGAAGGCGTGGCTCCGACCTTCGA AGACATCGCCTCGTCGAAGTACAAGGTCTCGCGTCCGCTGTTCTTCTACGTCAAGAACGCCCATGTCGGCACCGTCCCCG GCATCAAGGAATACGTGGCCGAGTTCACCTCCGAGAAGGCCTGGGGCCCCGAGGGCTACCTGTCGGAAAAGGGCCTGATC CCGCTGCCCGACGCCGTCCGCGCCGACGCCGCCAAAAAGGCCAATGCCTTTGCTCCGCTGACCATGTAA
Upstream 100 bases:
>100_bases TCGCTGATCCTGACTAGAGTCCCTCCTGTCGCCGGGACCTCCGGCGGCCGAGCTACCCTAGGGGGTCCAAGGGGCCCTTT CGCGCTCATTGGAGGCTACA
Downstream 100 bases:
>100_bases GACCTTTCGCCGAGAGTTGATCAGGGTCCCGCGACCGGCCACCCTCCGGCCGCGGGATCGGCTTTTCCGGGCCCTTGGCG GTCTGGTTCGTCATTCCCCG
Product: phosphate ABC transporter periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIRKTIALAAFAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIESTGSGGGLKLFCAGVGVEHPDIA NASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANTKTAPAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLP NEEIEVLGPPPTSGTRDAFVELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPTALG IFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRPLFFYVKNAHVGTVPGIKEYVAEFTSEKAWGPEGYLSEKGLI PLPDAVRADAAKKANAFAPLTM
Sequences:
>Translated_342_residues MIRKTIALAAFAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIESTGSGGGLKLFCAGVGVEHPDIA NASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANTKTAPAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLP NEEIEVLGPPPTSGTRDAFVELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPTALG IFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRPLFFYVKNAHVGTVPGIKEYVAEFTSEKAWGPEGYLSEKGLI PLPDAVRADAAKKANAFAPLTM >Mature_342_residues MIRKTIALAAFAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIESTGSGGGLKLFCAGVGVEHPDIA NASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANTKTAPAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLP NEEIEVLGPPPTSGTRDAFVELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPTALG IFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRPLFFYVKNAHVGTVPGIKEYVAEFTSEKAWGPEGYLSEKGLI PLPDAVRADAAKKANAFAPLTM
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36569; Mature: 36569
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKTIALAAFAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIESTG CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCC SGGGLKLFCAGVGVEHPDIANASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANTKTA CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEECCCCEEEECCCCC PAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLPNEEIEVLGPPPTSGTRDAFV CCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHHHH ELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPTALG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCEEE IFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRPLFFYVKNAHVGTVPGIKEYVA EEEHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCCCCCHHHHHH EFTSEKAWGPEGYLSEKGLIPLPDAVRADAAKKANAFAPLTM HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIRKTIALAAFAAVAVAGAAEARDQIRIVGSSTVYPFATTVAENFGKTSSFKTPVIESTG CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCC SGGGLKLFCAGVGVEHPDIANASRRIKKSEVETCAKNGVKEITEVQIGFDGIVLANTKTA CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEECCCCEEEECCCCC PAFNLTKGQIFQALAKEVPVDGKWVANPYSNWSQIDAKLPNEEIEVLGPPPTSGTRDAFV CCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCEEEECCCCCCCHHHHHH ELVMETGCLELPACADLKKADEKKFSSVFASLREDGRFIEAGENDNLIVQKLQSNPTALG HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCEEE IFGFSFLDQNSDKIQGSHIEGVAPTFEDIASSKYKVSRPLFFYVKNAHVGTVPGIKEYVA EEEHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCCCCCHHHHHH EFTSEKAWGPEGYLSEKGLIPLPDAVRADAAKKANAFAPLTM HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]