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The map label for this gene is 83313418

Identifier: 83313418

GI number: 83313418

Start: 4724054

End: 4724425

Strand: Reverse

Name: 83313418

Synonym: amb4319

Alternate gene names: NA

Gene position: 4724425-4724054 (Counterclockwise)

Preceding gene: 83313419

Following gene: 83313417

Centisome position: 95.11

GC content: 60.48

Gene sequence:

>372_bases
TTGCCCGCCGCATCACGATTTCAAAGGATATTGGAGAACGACATGGCTTACGTCGTCACCGAGAACTGCATCAAGTGTAA
GTACCAGGATTGCGTCGAAGTCTGCCCGGTGGACTGCTTCTACGAGGGCGAGAACTTCCTGGTGATCAACCCCGACGAAT
GCATCGATTGCGGCGTCTGCGAGCCGGAATGCCCGGCCGAAGCCATCTTCCCGGATTCCGATCCCAAGGCTACCGCCTGG
ACCGACACCAATCGCCAGTATGCCGGCTCGTGGCCCAACATCACCCGCAAGGGTGACGCTCCTGCCGATGCCGACGACTG
GAAGGGCAAGCCCGACAAGGCCAAGCTGCTGTCGCCCAATCCGGGCCGCTGA

Upstream 100 bases:

>100_bases
GTGCCGTAGGGCGGGGATGTCCCTCCCGCCGCTGGGGTTGAGCCCCGGGGGGTGACTGTGCTATCGCTTCCGCCGGATTT
TCTTCCGGCGGAGGCAAGCC

Downstream 100 bases:

>100_bases
TCCTTTCCGCAAGATATTGTAGCCGGCGCCGGCCCAGGACCCAGAGGGTCGTGGGGCGGCGTTTGCGCATGGAGACGTGG
CGGAAACGCAGGCCTTTGGG

Product: ferredoxin II

Products: NA

Alternate protein names: Ferredoxin II; FdII [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPAASRFQRILENDMAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSDPKATAW
TDTNRQYAGSWPNITRKGDAPADADDWKGKPDKAKLLSPNPGR

Sequences:

>Translated_123_residues
MPAASRFQRILENDMAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSDPKATAW
TDTNRQYAGSWPNITRKGDAPADADDWKGKPDKAKLLSPNPGR
>Mature_122_residues
PAASRFQRILENDMAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVCEPECPAEAIFPDSDPKATAWT
DTNRQYAGSWPNITRKGDAPADADDWKGKPDKAKLLSPNPGR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 13696; Mature: 13565

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAASRFQRILENDMAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVC
CCHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHCCCEEEECCCCEEEECCCCCEECCCC
EPECPAEAIFPDSDPKATAWTDTNRQYAGSWPNITRKGDAPADADDWKGKPDKAKLLSPN
CCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
PGR
CCC
>Mature Secondary Structure 
PAASRFQRILENDMAYVVTENCIKCKYQDCVEVCPVDCFYEGENFLVINPDECIDCGVC
CHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHCCCEEEECCCCEEEECCCCCEECCCC
EPECPAEAIFPDSDPKATAWTDTNRQYAGSWPNITRKGDAPADADDWKGKPDKAKLLSPN
CCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
PGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA