| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yoaE [H]
Identifier: 83313419
GI number: 83313419
Start: 4724517
End: 4725293
Strand: Reverse
Name: yoaE [H]
Synonym: amb4320
Alternate gene names: 83313419
Gene position: 4725293-4724517 (Counterclockwise)
Preceding gene: 83313423
Following gene: 83313418
Centisome position: 95.13
GC content: 67.31
Gene sequence:
>777_bases ATGAGCATGACGATGGCCTGGATCTCTGATCCCGAGATATGGATCAGCCTGGCGACCTTGGCGTTGCTCGAAATCGTGCT GGGGATCGACAATCTGGTCTATCTGGCCATCATTTCCAACCGGCTGCCCGAGCGCCTGCGTCCCCTGGGCCGGCGGCTGG GTCTGGCCTTCGCGGTCGTCACCCGCCTCGGCCTGCTGGCGTCGCTCAGCTGGATCGTCGGGCTGGTCGAGCCGGTCTTC GTGGTCTGGGACCACCCGGTCAGCTGGCGCGACATCATCCTGATCGGTGGCGGCACGTTCCTGGTGGCCAAGGCCACCCA CGAGATTCACGGCAGCCTGGAAGGCGAGGAGGAGACGGCGGGGGCCGTCGGCGAGGACGGGGCCGCCGGCAAGGCGGTCG AGGCCGGTCTGGCCTCGGTGGTGGTGCAGATCGCCGTGCTAGACATCGTCTTCTCGCTGGATTCGGTGATCACCGCCGTG GGCATGGCCCGCGACCTGGGCGTCATGGTGGCCGCCGTCATCCTGGCCTCGGCCGTGATGGTGGTGGCCGCCAATCCCCT GTCCGCGCTGATTGCGCGCCACCCCACCATCAAGATGCTGGCACTGTCGTTCCTGCTGCTGATCGGGGCCACCCTGGTGG CCGACGGGACCGGCTTCCACATGCCCAAGGGCTACATCTACTTCGCCATGGCCTTCTCGCTGGGGATTGAAATCCTCAAT CTGCTGGCCCGGCGCGGCAAGCGGGCGCCGGTCAAGCTGCGCACCCCCGTGCCGTAG
Upstream 100 bases:
>100_bases AATGTATTCACCGACGTTACGGAGAATTAAGGGAGTTCTGCGTGGATTCTTAGGCTGAATCCCTTACATTCCGTGAACCG AACCCGTCTCGAGGACAATC
Downstream 100 bases:
>100_bases GGCGGGGATGTCCCTCCCGCCGCTGGGGTTGAGCCCCGGGGGGTGACTGTGCTATCGCTTCCGCCGGATTTTCTTCCGGC GGAGGCAAGCCTTGCCCGCC
Product: membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSMTMAWISDPEIWISLATLALLEIVLGIDNLVYLAIISNRLPERLRPLGRRLGLAFAVVTRLGLLASLSWIVGLVEPVF VVWDHPVSWRDIILIGGGTFLVAKATHEIHGSLEGEEETAGAVGEDGAAGKAVEAGLASVVVQIAVLDIVFSLDSVITAV GMARDLGVMVAAVILASAVMVVAANPLSALIARHPTIKMLALSFLLLIGATLVADGTGFHMPKGYIYFAMAFSLGIEILN LLARRGKRAPVKLRTPVP
Sequences:
>Translated_258_residues MSMTMAWISDPEIWISLATLALLEIVLGIDNLVYLAIISNRLPERLRPLGRRLGLAFAVVTRLGLLASLSWIVGLVEPVF VVWDHPVSWRDIILIGGGTFLVAKATHEIHGSLEGEEETAGAVGEDGAAGKAVEAGLASVVVQIAVLDIVFSLDSVITAV GMARDLGVMVAAVILASAVMVVAANPLSALIARHPTIKMLALSFLLLIGATLVADGTGFHMPKGYIYFAMAFSLGIEILN LLARRGKRAPVKLRTPVP >Mature_257_residues SMTMAWISDPEIWISLATLALLEIVLGIDNLVYLAIISNRLPERLRPLGRRLGLAFAVVTRLGLLASLSWIVGLVEPVFV VWDHPVSWRDIILIGGGTFLVAKATHEIHGSLEGEEETAGAVGEDGAAGKAVEAGLASVVVQIAVLDIVFSLDSVITAVG MARDLGVMVAAVILASAVMVVAANPLSALIARHPTIKMLALSFLLLIGATLVADGTGFHMPKGYIYFAMAFSLGIEILNL LARRGKRAPVKLRTPVP
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=256, Percent_Identity=49.609375, Blast_Score=234, Evalue=5e-63, Organism=Escherichia coli, GI1789197, Length=249, Percent_Identity=49.7991967871486, Blast_Score=225, Evalue=3e-60, Organism=Escherichia coli, GI87082033, Length=244, Percent_Identity=49.1803278688525, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 27332; Mature: 27201
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTMAWISDPEIWISLATLALLEIVLGIDNLVYLAIISNRLPERLRPLGRRLGLAFAVV CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH TRLGLLASLSWIVGLVEPVFVVWDHPVSWRDIILIGGGTFLVAKATHEIHGSLEGEEETA HHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEEECHHHHCCCCCCCHHHC GAVGEDGAAGKAVEAGLASVVVQIAVLDIVFSLDSVITAVGMARDLGVMVAAVILASAVM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAANPLSALIARHPTIKMLALSFLLLIGATLVADGTGFHMPKGYIYFAMAFSLGIEILN HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LLARRGKRAPVKLRTPVP HHHHCCCCCCEEECCCCC >Mature Secondary Structure SMTMAWISDPEIWISLATLALLEIVLGIDNLVYLAIISNRLPERLRPLGRRLGLAFAVV CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH TRLGLLASLSWIVGLVEPVFVVWDHPVSWRDIILIGGGTFLVAKATHEIHGSLEGEEETA HHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEEECHHHHCCCCCCCHHHC GAVGEDGAAGKAVEAGLASVVVQIAVLDIVFSLDSVITAVGMARDLGVMVAAVILASAVM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAANPLSALIARHPTIKMLALSFLLLIGATLVADGTGFHMPKGYIYFAMAFSLGIEILN HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LLARRGKRAPVKLRTPVP HHHHCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]