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The map label for this gene is slyA [C]

Identifier: 83313345

GI number: 83313345

Start: 4656630

End: 4657052

Strand: Reverse

Name: slyA [C]

Synonym: amb4246

Alternate gene names: 83313345

Gene position: 4657052-4656630 (Counterclockwise)

Preceding gene: 83313346

Following gene: 83313344

Centisome position: 93.76

GC content: 65.48

Gene sequence:

>423_bases
ATGAGCCATTGCCCCCCAGTCCCTCCTCGGCTAAAAGATTTCGTCGTCGCAACGAATGAGTGGATGATGGGCGTTTCCCT
GAAACCGGTGCAAGCTCTCGACCTCTGGCGCGGAGCCATCGTCGAAAGCGTCCGGCGTGACGCCCCCGACCTGTCCGCCC
GCCAGATGGCGCTGCTGCTGACCGTCTACCTCATTCCGCCGCCCCATACGGTGCGCGGCCTGGCGGAGACGCTGAACATC
TCCAAGCCCGCCATCACCCGTGCGCTGGACCGCCTGACCGAGTTTGGCCTGGTCAAGCGCAAGGTCGACGACCAGGATCG
CCGCTCGGTGCTGATTCAGCGCACGGTGAAGGGCTCGGTGTTCCTGCGCGAGTTCGGCGACATCATCGTCACTGCCGCCG
CCGACGCCAACGAGGCGGGCTGA

Upstream 100 bases:

>100_bases
ACCTCATTGGAAAAGGCGGCCAAGCGGAGATCCCTCCTCCCGGTGGTCGTCGGGATGACAATTCGGAATCCCGGGGTATG
ACAATTCGGCGGGGGGCCAT

Downstream 100 bases:

>100_bases
GGCTCTGCTGGTCATTCCGAGGCCCGAACTTGTCATTCCGAGGCAAAGCCGAGGAATCTCCGTCTGTTGCGGCCTGGCCA
GTTCGGAAACAGCATGCCAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSHCPPVPPRLKDFVVATNEWMMGVSLKPVQALDLWRGAIVESVRRDAPDLSARQMALLLTVYLIPPPHTVRGLAETLNI
SKPAITRALDRLTEFGLVKRKVDDQDRRSVLIQRTVKGSVFLREFGDIIVTAAADANEAG

Sequences:

>Translated_140_residues
MSHCPPVPPRLKDFVVATNEWMMGVSLKPVQALDLWRGAIVESVRRDAPDLSARQMALLLTVYLIPPPHTVRGLAETLNI
SKPAITRALDRLTEFGLVKRKVDDQDRRSVLIQRTVKGSVFLREFGDIIVTAAADANEAG
>Mature_139_residues
SHCPPVPPRLKDFVVATNEWMMGVSLKPVQALDLWRGAIVESVRRDAPDLSARQMALLLTVYLIPPPHTVRGLAETLNIS
KPAITRALDRLTEFGLVKRKVDDQDRRSVLIQRTVKGSVFLREFGDIIVTAAADANEAG

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15498; Mature: 15367

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHCPPVPPRLKDFVVATNEWMMGVSLKPVQALDLWRGAIVESVRRDAPDLSARQMALLL
CCCCCCCCCCCHHHEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TVYLIPPPHTVRGLAETLNISKPAITRALDRLTEFGLVKRKVDDQDRRSVLIQRTVKGSV
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
FLREFGDIIVTAAADANEAG
HHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure 
SHCPPVPPRLKDFVVATNEWMMGVSLKPVQALDLWRGAIVESVRRDAPDLSARQMALLL
CCCCCCCCCCHHHEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TVYLIPPPHTVRGLAETLNISKPAITRALDRLTEFGLVKRKVDDQDRRSVLIQRTVKGSV
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
FLREFGDIIVTAAADANEAG
HHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA