| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313346
Identifier: 83313346
GI number: 83313346
Start: 4657204
End: 4657905
Strand: Reverse
Name: 83313346
Synonym: amb4247
Alternate gene names: NA
Gene position: 4657905-4657204 (Counterclockwise)
Preceding gene: 83313347
Following gene: 83313345
Centisome position: 93.77
GC content: 70.23
Gene sequence:
>702_bases GTGAGCGCCATCACCCACGCCATGGTCCTGGCCGCCGGCCTGGGCCTCAGGATGCGGCCCATCACCCTGACGACGCCCAA GCCGCTGGTCAGCGTCGCCGGGCGCACCATGCTGGACCGGGCGCTGGACCATGTGGAGCGGGCCGGCATCGACGATATCG TGGTCAACACCCACTGGCTGGCCGACACGGTGGTCGAGCATCTGGCCGGCCGGGGCGAGATCACCATCTCCCACGAGCCG GACCTGCTGGAGACCGGCGGCGGGGTGGCCAAGGCCCTGCCCCATCTCGGCCATTCCTCGTTCTACGTGGTCAACAGCGA CATCATCTGGACCGATGGTCCGGTCCCGGCCCTGGCCCGTCTGGCGCGGATGTGGGACCCCAACCGCATGGACGCCCTGC TGCTGCTGCAAAAAGTGGAGGGCGCCGTGGGCTACGAGGGCAAGGGCGATTTCTTCCTCGACGCCGCCGACGTTCCCCAC CGGCGGGGCGAGGCCCCGTCGGCGCCGTATCTGTTCTCCGGCGTGCAGGTGCTGCACCACCGGCTGTTCGAGGGCGCGCC CGAGGGCAAGTTCTCGCTGAACGTGCTTTATGACCGGGCCGCCCAGGCCCGCCGCCTGTTCGGGCTGGTCCACGACGGCA ACTGGTACCACGTGGGCACCCCGGAGGCGCTGCCCGAGGTGGAGCGTCTGCTGTCGCCCTGA
Upstream 100 bases:
>100_bases GGCGGCTGCTGGAGGCCTCGTGCCGCCATCCGGTCCTGGCCGAGCTGAGCCGCTGGCTCGACCGCCACATCCCCAAGGCC TCGCGGGGAGTGCCCAGCCC
Downstream 100 bases:
>100_bases CCCCCGGGTCATTCCGAGCGCAGGCGAGGAATCTCGGCCTGGGACGGCCCTACCTCATTGGAAAAGGCGGCCAAGCGGAG ATCCCTCCTCCCGGTGGTCG
Product: nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Products: NA
Alternate protein names: Nucleotidyltransferase Family Protein; Nucleotidyl Transferase Family Protein; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Nucleotidyl Transferase Superfamily; Nucleotidyltransferase; Sugar-Phosphate Nucleotidyl Transferase; Mannose-1-Phosphate Guanylyltransferase; Mannose-1-Phosphate Guanyltransferase; Nucleotidyl Transferase Protein; Mannose-1-Phosphate Guanyltransferase-Related Protein; Nucleotidyltransferase Protein; Transaldolase AB; ADP-Glucose Pyrophosphorylase; Aminoglycoside Phosphotransferase; Nucleotidyl Transferase Superfamily Protein; HAD-Superfamily Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSAITHAMVLAAGLGLRMRPITLTTPKPLVSVAGRTMLDRALDHVERAGIDDIVVNTHWLADTVVEHLAGRGEITISHEP DLLETGGGVAKALPHLGHSSFYVVNSDIIWTDGPVPALARLARMWDPNRMDALLLLQKVEGAVGYEGKGDFFLDAADVPH RRGEAPSAPYLFSGVQVLHHRLFEGAPEGKFSLNVLYDRAAQARRLFGLVHDGNWYHVGTPEALPEVERLLSP
Sequences:
>Translated_233_residues MSAITHAMVLAAGLGLRMRPITLTTPKPLVSVAGRTMLDRALDHVERAGIDDIVVNTHWLADTVVEHLAGRGEITISHEP DLLETGGGVAKALPHLGHSSFYVVNSDIIWTDGPVPALARLARMWDPNRMDALLLLQKVEGAVGYEGKGDFFLDAADVPH RRGEAPSAPYLFSGVQVLHHRLFEGAPEGKFSLNVLYDRAAQARRLFGLVHDGNWYHVGTPEALPEVERLLSP >Mature_232_residues SAITHAMVLAAGLGLRMRPITLTTPKPLVSVAGRTMLDRALDHVERAGIDDIVVNTHWLADTVVEHLAGRGEITISHEPD LLETGGGVAKALPHLGHSSFYVVNSDIIWTDGPVPALARLARMWDPNRMDALLLLQKVEGAVGYEGKGDFFLDAADVPHR RGEAPSAPYLFSGVQVLHHRLFEGAPEGKFSLNVLYDRAAQARRLFGLVHDGNWYHVGTPEALPEVERLLSP
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11761621, Length=228, Percent_Identity=25.8771929824561, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI11761619, Length=228, Percent_Identity=25.8771929824561, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI133931050, Length=231, Percent_Identity=25.1082251082251, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320148, Length=112, Percent_Identity=34.8214285714286, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355443, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24644084, Length=229, Percent_Identity=26.2008733624454, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25395; Mature: 25264
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITHAMVLAAGLGLRMRPITLTTPKPLVSVAGRTMLDRALDHVERAGIDDIVVNTHWL CCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH ADTVVEHLAGRGEITISHEPDLLETGGGVAKALPHLGHSSFYVVNSDIIWTDGPVPALAR HHHHHHHHCCCCCEEECCCCCHHHCCCCHHHHHHHCCCCEEEEEECCEEECCCCHHHHHH LARMWDPNRMDALLLLQKVEGAVGYEGKGDFFLDAADVPHRRGEAPSAPYLFSGVQVLHH HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH RLFEGAPEGKFSLNVLYDRAAQARRLFGLVHDGNWYHVGTPEALPEVERLLSP HHHCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHHCC >Mature Secondary Structure SAITHAMVLAAGLGLRMRPITLTTPKPLVSVAGRTMLDRALDHVERAGIDDIVVNTHWL CHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH ADTVVEHLAGRGEITISHEPDLLETGGGVAKALPHLGHSSFYVVNSDIIWTDGPVPALAR HHHHHHHHCCCCCEEECCCCCHHHCCCCHHHHHHHCCCCEEEEEECCEEECCCCHHHHHH LARMWDPNRMDALLLLQKVEGAVGYEGKGDFFLDAADVPHRRGEAPSAPYLFSGVQVLHH HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH RLFEGAPEGKFSLNVLYDRAAQARRLFGLVHDGNWYHVGTPEALPEVERLLSP HHHCCCCCCCEEEHHHHHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA