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The map label for this gene is ybfB [H]

Identifier: 83313248

GI number: 83313248

Start: 4557430

End: 4558659

Strand: Reverse

Name: ybfB [H]

Synonym: amb4149

Alternate gene names: 83313248

Gene position: 4558659-4557430 (Counterclockwise)

Preceding gene: 83313249

Following gene: 83313247

Centisome position: 91.78

GC content: 69.02

Gene sequence:

>1230_bases
ATGGAGGTCGAGATGAAGACAAACGACACACGGCGCCGCACGATGATTCTGGCGGTGGTGTCGGCGGCGCTGATCATGAG
CGCCGCCATGGGAACCCGCCAGACATTCGGCCTGTTCCTCGGGCCGTTTTCCTATGATCGCGGGGTGCCCGTCACCCTGG
TCGCCTTTGCTATCGCCCTGCACAATCTGGCCTGGGGGCTGGCGCAGCCCTTTGCCGGCGCGGCGGCCGACCGCCATGGC
GCCTTGCCGGTGATCGGCTTCGGTGCGCTTGCCTATGCCGGGGGGCTGGCCCTGTCCGCCCTGGTGGCCAGCGACGCCGC
CCTCGTCCTCGGCATGGGCCTGCTGGTGGGGATCGGGATCAGCTGCACCAGCTTCGGCGTGGTCATGACCGCAATCGGCA
AGATGGCGCCGCCCGAAACCCGGAGCATGGCCATGGGTCTGGCCAGCGCCGGCGGGTCGCTCGGGCAGGTTCTCCTGGTC
CCGGTGGTCCAGTCGGTCACCGCAAGCGGCGGCATGGCCTGGTCGTTGTTGGTCCTGGCCGCCGTGATCCTGGCGGCGGC
GCCCCTGGGGTTCTTTCTTCGCCGAGACGAGCCGGTCCCGCCGCAATCCTCGGCCGGTCCGCCGCTCGGGGCCATCCTGG
CGCAGGCGGCGCGTCACCGGGGCTATCGCCTGCTGACCGTCGGGTTCTTCGCCTGCGGTTTCCAACTGGCTTTCATCGCC
ACCCATCTGCCGGGCTACCTGTCCCTGTGCCATATGCCGGTGGGCCTGGGCGCCATGGCACTGGCGCTGATCGGGCTGTT
CAACATGGCGGGAAGCTGGGGATGCGGCTGGCTGGGCGGGCGCTTCGCCCAGGGGCCGGTGCTGGGCTGGCTGTACCTGA
TCCGGGGAGCCGCCATCACCACCTTCGTCGCCCTGCCCAAAAGCGAGATATCCGTGGTGATCTTCGCGGCGATCATGGGA
TTGACCTGGCTGGGGACGGTGCCCCTGACCAGCGGGCTGGTGGCCCGGATCTTCGGGGTGCAGCATCTGGGCGCACTGTT
CGGACTGTGTTTCCTCAGCCATCAGATCGGCTCGTTTCTCGGGGCCTGGCTGGGGGGGCTGGTGCTGGACCTGACCGGGT
CCTATTCCCTGATCTGGGCGGCGACGGCTGCCTCGGGACTGGTGGCGGCCCTGCTGCACTTTCCCATCGGCAATACGCCG
GCGGGGCTTGCTCGCCCGGTCCAGGCGTGA

Upstream 100 bases:

>100_bases
GCCCAGGTGGACTCTGCCGGATAGATGAGGAGTCCTCATCCATCCGCGAAGGCTTCTCGTTTGCCGCCGTCATGGCCGCT
TTCCATTCTGAGGGTTCAGG

Downstream 100 bases:

>100_bases
GGGGGCATGGTCATGGAGCCCATCTCCCTTCTGTGCCGCGACGGCTACGAACTGCTGGGGCATTTCTGGCGCCCCGAGGG
GGCGGTGGACGCGGGAACCG

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MEVEMKTNDTRRRTMILAVVSAALIMSAAMGTRQTFGLFLGPFSYDRGVPVTLVAFAIALHNLAWGLAQPFAGAAADRHG
ALPVIGFGALAYAGGLALSALVASDAALVLGMGLLVGIGISCTSFGVVMTAIGKMAPPETRSMAMGLASAGGSLGQVLLV
PVVQSVTASGGMAWSLLVLAAVILAAAPLGFFLRRDEPVPPQSSAGPPLGAILAQAARHRGYRLLTVGFFACGFQLAFIA
THLPGYLSLCHMPVGLGAMALALIGLFNMAGSWGCGWLGGRFAQGPVLGWLYLIRGAAITTFVALPKSEISVVIFAAIMG
LTWLGTVPLTSGLVARIFGVQHLGALFGLCFLSHQIGSFLGAWLGGLVLDLTGSYSLIWAATAASGLVAALLHFPIGNTP
AGLARPVQA

Sequences:

>Translated_409_residues
MEVEMKTNDTRRRTMILAVVSAALIMSAAMGTRQTFGLFLGPFSYDRGVPVTLVAFAIALHNLAWGLAQPFAGAAADRHG
ALPVIGFGALAYAGGLALSALVASDAALVLGMGLLVGIGISCTSFGVVMTAIGKMAPPETRSMAMGLASAGGSLGQVLLV
PVVQSVTASGGMAWSLLVLAAVILAAAPLGFFLRRDEPVPPQSSAGPPLGAILAQAARHRGYRLLTVGFFACGFQLAFIA
THLPGYLSLCHMPVGLGAMALALIGLFNMAGSWGCGWLGGRFAQGPVLGWLYLIRGAAITTFVALPKSEISVVIFAAIMG
LTWLGTVPLTSGLVARIFGVQHLGALFGLCFLSHQIGSFLGAWLGGLVLDLTGSYSLIWAATAASGLVAALLHFPIGNTP
AGLARPVQA
>Mature_409_residues
MEVEMKTNDTRRRTMILAVVSAALIMSAAMGTRQTFGLFLGPFSYDRGVPVTLVAFAIALHNLAWGLAQPFAGAAADRHG
ALPVIGFGALAYAGGLALSALVASDAALVLGMGLLVGIGISCTSFGVVMTAIGKMAPPETRSMAMGLASAGGSLGQVLLV
PVVQSVTASGGMAWSLLVLAAVILAAAPLGFFLRRDEPVPPQSSAGPPLGAILAQAARHRGYRLLTVGFFACGFQLAFIA
THLPGYLSLCHMPVGLGAMALALIGLFNMAGSWGCGWLGGRFAQGPVLGWLYLIRGAAITTFVALPKSEISVVIFAAIMG
LTWLGTVPLTSGLVARIFGVQHLGALFGLCFLSHQIGSFLGAWLGGLVLDLTGSYSLIWAATAASGLVAALLHFPIGNTP
AGLARPVQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789969, Length=369, Percent_Identity=25.7452574525745, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41839; Mature: 41839

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVEMKTNDTRRRTMILAVVSAALIMSAAMGTRQTFGLFLGPFSYDRGVPVTLVAFAIAL
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
HNLAWGLAQPFAGAAADRHGALPVIGFGALAYAGGLALSALVASDAALVLGMGLLVGIGI
HHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SCTSFGVVMTAIGKMAPPETRSMAMGLASAGGSLGQVLLVPVVQSVTASGGMAWSLLVLA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVILAAAPLGFFLRRDEPVPPQSSAGPPLGAILAQAARHRGYRLLTVGFFACGFQLAFIA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
THLPGYLSLCHMPVGLGAMALALIGLFNMAGSWGCGWLGGRFAQGPVLGWLYLIRGAAIT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TFVALPKSEISVVIFAAIMGLTWLGTVPLTSGLVARIFGVQHLGALFGLCFLSHQIGSFL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAWLGGLVLDLTGSYSLIWAATAASGLVAALLHFPIGNTPAGLARPVQA
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEVEMKTNDTRRRTMILAVVSAALIMSAAMGTRQTFGLFLGPFSYDRGVPVTLVAFAIAL
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
HNLAWGLAQPFAGAAADRHGALPVIGFGALAYAGGLALSALVASDAALVLGMGLLVGIGI
HHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SCTSFGVVMTAIGKMAPPETRSMAMGLASAGGSLGQVLLVPVVQSVTASGGMAWSLLVLA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVILAAAPLGFFLRRDEPVPPQSSAGPPLGAILAQAARHRGYRLLTVGFFACGFQLAFIA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
THLPGYLSLCHMPVGLGAMALALIGLFNMAGSWGCGWLGGRFAQGPVLGWLYLIRGAAIT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TFVALPKSEISVVIFAAIMGLTWLGTVPLTSGLVARIFGVQHLGALFGLCFLSHQIGSFL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAWLGGLVLDLTGSYSLIWAATAASGLVAALLHFPIGNTPAGLARPVQA
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]