| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313247
Identifier: 83313247
GI number: 83313247
Start: 4556491
End: 4557423
Strand: Reverse
Name: 83313247
Synonym: amb4148
Alternate gene names: NA
Gene position: 4557423-4556491 (Counterclockwise)
Preceding gene: 83313248
Following gene: 83313246
Centisome position: 91.75
GC content: 66.24
Gene sequence:
>933_bases ATGGTCATGGAGCCCATCTCCCTTCTGTGCCGCGACGGCTACGAACTGCTGGGGCATTTCTGGCGCCCCGAGGGGGCGGT GGACGCGGGAACCGTCATCATCAATCCCGCCACCGGAGTGCTGGCCCGCTACTATCACCGCTACGCACGCTTTCTGGCCG AACAGGGGTTCGCGGTCCTGACCTACGATTATCGCGGCATCGGCCTGTCGCGGCCGGGGCGGATTCAGGGTGCCGGGATT CGCTGGCGCGATTGGGGCGAGCTGGATTTCGACGCGGCCATCGCCTGGGCGCAGCGGCGGCGCCCCGATGGAATGCTGGC AGTGGTCGGGCACAGCATCGGCGGCTTTCTTCCGGGCTTTGCCCCCGGCGCCGCTCGCATCGACCGTCTTCTGACCGTGG GGGCGCAATACGCCTATTGGCGGGACTATGCCGCCGACCGGCGTCTGCGGCTGATGCTGAAATGGCATGTTGCGATGCCG GTGCTGACCGCTCTGCTGGGCTATTTCCCGGGACGGCGGCTGGGCTGGCTGGAGGATCTACCCGCCGGCGTGGCTCATGA GTGGAGCTTTCGCCGCGAGAAGATGGAGGTCAGCTATCCCCAGCACGAACGCCCGCTGATCCTCGACCGCTTCGCCGCCG TACGGGCGCAGATTTTGGCGGTGGGCATGGCCGATGATGAATTCGGGACGCCCCGAGCCATCCTTCGCGGGCTGAGCTAT TACCGGAACAGCGAGCGGCAGAGGGTGTCGCTGGCTCCCGCCGATCTGGGCTTTGCGGATGTGGGGCATTTCGGCCTGTT CCATGCCCGTCATCGCGACGGATTCTGGCGGCAGAGCTGTGCGTGGCTGCGGGACGGGCTTTCTCCCTGGCCGCCAGACG CGGTACTTCTGCCGGAAGGGGGAACGTGGAAACAGCGGATTTCATATGCCTGA
Upstream 100 bases:
>100_bases GGCGGCGACGGCTGCCTCGGGACTGGTGGCGGCCCTGCTGCACTTTCCCATCGGCAATACGCCGGCGGGGCTTGCTCGCC CGGTCCAGGCGTGAGGGGGC
Downstream 100 bases:
>100_bases AGGATGGAGTACCTTATCGGGATCCGTGTGTTTCCGGTTGAGAGACCGCACCAAAGGCCGGGGGCGTTTTGAACCGCATT GCCGCTTTCGCGACCGGGCA
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA
Sequences:
>Translated_310_residues MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA >Mature_310_residues MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35141; Mature: 35141
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVL CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE TYDYRGIGLSRPGRIQGAGIRWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGF EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCCC APGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMPVLTALLGYFPGRRLGWLEDL CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC PAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEG HHCCCCCEEEECCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCC GTWKQRISYA CCHHHHCCCC >Mature Secondary Structure MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVL CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE TYDYRGIGLSRPGRIQGAGIRWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGF EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCCC APGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMPVLTALLGYFPGRRLGWLEDL CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC PAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEG HHCCCCCEEEECCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCC GTWKQRISYA CCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA