Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83313247

Identifier: 83313247

GI number: 83313247

Start: 4556491

End: 4557423

Strand: Reverse

Name: 83313247

Synonym: amb4148

Alternate gene names: NA

Gene position: 4557423-4556491 (Counterclockwise)

Preceding gene: 83313248

Following gene: 83313246

Centisome position: 91.75

GC content: 66.24

Gene sequence:

>933_bases
ATGGTCATGGAGCCCATCTCCCTTCTGTGCCGCGACGGCTACGAACTGCTGGGGCATTTCTGGCGCCCCGAGGGGGCGGT
GGACGCGGGAACCGTCATCATCAATCCCGCCACCGGAGTGCTGGCCCGCTACTATCACCGCTACGCACGCTTTCTGGCCG
AACAGGGGTTCGCGGTCCTGACCTACGATTATCGCGGCATCGGCCTGTCGCGGCCGGGGCGGATTCAGGGTGCCGGGATT
CGCTGGCGCGATTGGGGCGAGCTGGATTTCGACGCGGCCATCGCCTGGGCGCAGCGGCGGCGCCCCGATGGAATGCTGGC
AGTGGTCGGGCACAGCATCGGCGGCTTTCTTCCGGGCTTTGCCCCCGGCGCCGCTCGCATCGACCGTCTTCTGACCGTGG
GGGCGCAATACGCCTATTGGCGGGACTATGCCGCCGACCGGCGTCTGCGGCTGATGCTGAAATGGCATGTTGCGATGCCG
GTGCTGACCGCTCTGCTGGGCTATTTCCCGGGACGGCGGCTGGGCTGGCTGGAGGATCTACCCGCCGGCGTGGCTCATGA
GTGGAGCTTTCGCCGCGAGAAGATGGAGGTCAGCTATCCCCAGCACGAACGCCCGCTGATCCTCGACCGCTTCGCCGCCG
TACGGGCGCAGATTTTGGCGGTGGGCATGGCCGATGATGAATTCGGGACGCCCCGAGCCATCCTTCGCGGGCTGAGCTAT
TACCGGAACAGCGAGCGGCAGAGGGTGTCGCTGGCTCCCGCCGATCTGGGCTTTGCGGATGTGGGGCATTTCGGCCTGTT
CCATGCCCGTCATCGCGACGGATTCTGGCGGCAGAGCTGTGCGTGGCTGCGGGACGGGCTTTCTCCCTGGCCGCCAGACG
CGGTACTTCTGCCGGAAGGGGGAACGTGGAAACAGCGGATTTCATATGCCTGA

Upstream 100 bases:

>100_bases
GGCGGCGACGGCTGCCTCGGGACTGGTGGCGGCCCTGCTGCACTTTCCCATCGGCAATACGCCGGCGGGGCTTGCTCGCC
CGGTCCAGGCGTGAGGGGGC

Downstream 100 bases:

>100_bases
AGGATGGAGTACCTTATCGGGATCCGTGTGTTTCCGGTTGAGAGACCGCACCAAAGGCCGGGGGCGTTTTGAACCGCATT
GCCGCTTTCGCGACCGGGCA

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI
RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP
VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY
YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA

Sequences:

>Translated_310_residues
MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI
RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP
VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY
YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA
>Mature_310_residues
MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVLTYDYRGIGLSRPGRIQGAGI
RWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGFAPGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMP
VLTALLGYFPGRRLGWLEDLPAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY
YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEGGTWKQRISYA

Specific function: Unknown

COG id: COG4757

COG function: function code R; Predicted alpha/beta hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35141; Mature: 35141

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVL
CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE
TYDYRGIGLSRPGRIQGAGIRWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGF
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCCC
APGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMPVLTALLGYFPGRRLGWLEDL
CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
PAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH
YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEG
HHCCCCCEEEECCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCC
GTWKQRISYA
CCHHHHCCCC
>Mature Secondary Structure
MVMEPISLLCRDGYELLGHFWRPEGAVDAGTVIINPATGVLARYYHRYARFLAEQGFAVL
CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEE
TYDYRGIGLSRPGRIQGAGIRWRDWGELDFDAAIAWAQRRRPDGMLAVVGHSIGGFLPGF
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCHHCCCCCCC
APGAARIDRLLTVGAQYAYWRDYAADRRLRLMLKWHVAMPVLTALLGYFPGRRLGWLEDL
CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
PAGVAHEWSFRREKMEVSYPQHERPLILDRFAAVRAQILAVGMADDEFGTPRAILRGLSY
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH
YRNSERQRVSLAPADLGFADVGHFGLFHARHRDGFWRQSCAWLRDGLSPWPPDAVLLPEG
HHCCCCCEEEECCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCC
GTWKQRISYA
CCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA