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The map label for this gene is atpC

Identifier: 83313237

GI number: 83313237

Start: 4543905

End: 4544306

Strand: Reverse

Name: atpC

Synonym: amb4138

Alternate gene names: 83313237

Gene position: 4544306-4543905 (Counterclockwise)

Preceding gene: 83313238

Following gene: 83313236

Centisome position: 91.49

GC content: 64.93

Gene sequence:

>402_bases
ATGGCCGAGAAGATTCAGTTCGAATTGGTGTCCCCGGCGAAGCTGTTGGTTTCGTCCAAGGTGGACATGGTCGTGGTGCC
CGGAGCCGAAGGCGATTTCGGTGCCCTGGCCCTGCACGCCCCGATGATCACCACCGTGCGTCCGGGTGTCATCGACATCC
ATGACGGCGGCAAGGTCTCGTCCTCGGTTTTCGTGGCCGGCGGTTTCGCTGAGGTCAACGAAGAGCGCATCACCGTCCTG
GCCGAGGAAGCCATTCCGGTGGGCGAACTGACCGCTGAGATGGCCGAAGCCCGCAAGAAGGCCGCCAAGGAAGCCCTGGA
CGACGCCAAGTCGGATCGGGACAAGGCCCATGCCGGCCGCCTGATGCTGGTGGCCGAAGCCATGGCCGCCGCGGTCGCCT
GA

Upstream 100 bases:

>100_bases
GCCAAGAAGATGGCTGCCGAGGCGGCCTAAGGCTTTCGGGAATAATTAGGGGCGGGTTCCTTCGGGGACCCGCCGCTAAA
AAAGTTGAAGGACTCGCGGC

Downstream 100 bases:

>100_bases
TCGGCGCATCATCGTTTCGCGAAAGGGCCGCTCCCGCCGGGGGCGGCCCTTTTGTCTTGAAAATCCCCTTTCTTGCCACA
GAATGGGGGCTTCACGCGGG

Product: ATP synthase epsilon chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAEKIQFELVSPAKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERITVL
AEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHAGRLMLVAEAMAAAVA

Sequences:

>Translated_133_residues
MAEKIQFELVSPAKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERITVL
AEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHAGRLMLVAEAMAAAVA
>Mature_132_residues
AEKIQFELVSPAKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERITVLA
EEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHAGRLMLVAEAMAAAVA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=118, Percent_Identity=32.2033898305085, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_MAGSA (Q2VZN3)

Other databases:

- EMBL:   AP007255
- RefSeq:   YP_423501.1
- ProteinModelPortal:   Q2VZN3
- SMR:   Q2VZN3
- STRING:   Q2VZN3
- GeneID:   3803332
- GenomeReviews:   AP007255_GR
- KEGG:   mag:amb4138
- NMPDR:   fig|342108.5.peg.3718
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   HAPTMTT
- PhylomeDB:   Q2VZN3
- ProtClustDB:   CLSK745250
- BioCyc:   MMAG342108:AMB4138-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13825; Mature: 13694

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKIQFELVSPAKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVS
CCCCEEEEEECHHHHHHCCCCCEEEECCCCCCCCEEEECCCEEEEECCCEEEECCCCCCC
SSVFVAGGFAEVNEERITVLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHAGR
CEEEEECCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCH
LMLVAEAMAAAVA
HHHHHHHHHHHCC
>Mature Secondary Structure 
AEKIQFELVSPAKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVS
CCCEEEEEECHHHHHHCCCCCEEEECCCCCCCCEEEECCCEEEEECCCEEEECCCCCCC
SSVFVAGGFAEVNEERITVLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHAGR
CEEEEECCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCH
LMLVAEAMAAAVA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA