| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313236
Identifier: 83313236
GI number: 83313236
Start: 4542967
End: 4543848
Strand: Reverse
Name: 83313236
Synonym: amb4137
Alternate gene names: NA
Gene position: 4543848-4542967 (Counterclockwise)
Preceding gene: 83313237
Following gene: 83313235
Centisome position: 91.48
GC content: 65.87
Gene sequence:
>882_bases TTGAAAATCCCCTTTCTTGCCACAGAATGGGGGCTTCACGCGGGAGCGGACATGCAAGGCAGGACGGGATGGAGCGCCGA CGACATCGCCTGGGACCGGTTCGATCCCGGTCAGGTGAACGACGGTATCCTGAAGGTGATCAAGGCCGCCGCCATGGTCG AGCGCAATGCTGCCGACTACACCTTGTATCTTGCCCGGGTGTTCCGTGATGATCCCGCCTTCGTCGCCATCCTCGAACAG TGGCGGGCCGACGAGATCCGCCACGGCGAGGCCCTGGGCCGCTATGCCGAGATGGCCGATCCTTCCTTTGTCTTCGCCCG GCGGTTCCAGCGGTTCACCGACGGCTACCGCATCCCGGTGGATGCCGAAACCTCGGTGCGGGGATCGGTCACCGGCGAAT TGCTGGCCCGCTGCATCGTCGAGACCGGAACCTCGTCCTTTTATTGCGCCGTTCGCGACGCTACCCGGGAGCCGGTGCTG CGCGAGCTGTGCCATCGCATTGCCGGCGACGAGTTCCGGCATTACAAGCTGTTCTACACCGCCATGCGCCATCGCCAGGG GCGGGATCGGCTGCCGGTCTGGCGCCGGGCCCTGGTGGCGGTGGGGCGTATCCGCGAAAGCGACGACGACGAGTTGGCCT ATGCCTGGTTCGCGGCCAATGAGCCCGAGGAGGCGGTTTACGACCGGCGGCGCTGCAACGCCGCCTATGCCTCGCGTGCC TATGCACTTTATGGCAAGGTGCATGCCGAGCGGGCGGCCAGCATGGTGGTCAAGGCGGTGGGGCTTGATCCCCGGGGCTG GCTGGGACGACGGGCCCGGGATTTCGCCTGGGGCAAGATGCAGCAACGTTCGCGCCAGTCGGCCATGGGTTCGGGAGTGT AA
Upstream 100 bases:
>100_bases GCCTGATGCTGGTGGCCGAAGCCATGGCCGCCGCGGTCGCCTGATCGGCGCATCATCGTTTCGCGAAAGGGCCGCTCCCG CCGGGGGCGGCCCTTTTGTC
Downstream 100 bases:
>100_bases GGGGTCATGAGCGGCAACGCATTATGGCAATACCGGTGGAGCGAGGAGTTCGCCCTGGGCGATCCCCTGGTGGATGCCCA GCATCGCGCCTTCTTCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKIPFLATEWGLHAGADMQGRTGWSADDIAWDRFDPGQVNDGILKVIKAAAMVERNAADYTLYLARVFRDDPAFVAILEQ WRADEIRHGEALGRYAEMADPSFVFARRFQRFTDGYRIPVDAETSVRGSVTGELLARCIVETGTSSFYCAVRDATREPVL RELCHRIAGDEFRHYKLFYTAMRHRQGRDRLPVWRRALVAVGRIRESDDDELAYAWFAANEPEEAVYDRRRCNAAYASRA YALYGKVHAERAASMVVKAVGLDPRGWLGRRARDFAWGKMQQRSRQSAMGSGV
Sequences:
>Translated_293_residues MKIPFLATEWGLHAGADMQGRTGWSADDIAWDRFDPGQVNDGILKVIKAAAMVERNAADYTLYLARVFRDDPAFVAILEQ WRADEIRHGEALGRYAEMADPSFVFARRFQRFTDGYRIPVDAETSVRGSVTGELLARCIVETGTSSFYCAVRDATREPVL RELCHRIAGDEFRHYKLFYTAMRHRQGRDRLPVWRRALVAVGRIRESDDDELAYAWFAANEPEEAVYDRRRCNAAYASRA YALYGKVHAERAASMVVKAVGLDPRGWLGRRARDFAWGKMQQRSRQSAMGSGV >Mature_293_residues MKIPFLATEWGLHAGADMQGRTGWSADDIAWDRFDPGQVNDGILKVIKAAAMVERNAADYTLYLARVFRDDPAFVAILEQ WRADEIRHGEALGRYAEMADPSFVFARRFQRFTDGYRIPVDAETSVRGSVTGELLARCIVETGTSSFYCAVRDATREPVL RELCHRIAGDEFRHYKLFYTAMRHRQGRDRLPVWRRALVAVGRIRESDDDELAYAWFAANEPEEAVYDRRRCNAAYASRA YALYGKVHAERAASMVVKAVGLDPRGWLGRRARDFAWGKMQQRSRQSAMGSGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33326; Mature: 33326
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPFLATEWGLHAGADMQGRTGWSADDIAWDRFDPGQVNDGILKVIKAAAMVERNAADY CCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH TLYLARVFRDDPAFVAILEQWRADEIRHGEALGRYAEMADPSFVFARRFQRFTDGYRIPV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC DAETSVRGSVTGELLARCIVETGTSSFYCAVRDATREPVLRELCHRIAGDEFRHYKLFYT CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHH AMRHRQGRDRLPVWRRALVAVGRIRESDDDELAYAWFAANEPEEAVYDRRRCNAAYASRA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH YALYGKVHAERAASMVVKAVGLDPRGWLGRRARDFAWGKMQQRSRQSAMGSGV HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIPFLATEWGLHAGADMQGRTGWSADDIAWDRFDPGQVNDGILKVIKAAAMVERNAADY CCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH TLYLARVFRDDPAFVAILEQWRADEIRHGEALGRYAEMADPSFVFARRFQRFTDGYRIPV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC DAETSVRGSVTGELLARCIVETGTSSFYCAVRDATREPVLRELCHRIAGDEFRHYKLFYT CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHH AMRHRQGRDRLPVWRRALVAVGRIRESDDDELAYAWFAANEPEEAVYDRRRCNAAYASRA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH YALYGKVHAERAASMVVKAVGLDPRGWLGRRARDFAWGKMQQRSRQSAMGSGV HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA