| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313211
Identifier: 83313211
GI number: 83313211
Start: 4516503
End: 4517087
Strand: Reverse
Name: 83313211
Synonym: amb4112
Alternate gene names: NA
Gene position: 4517087-4516503 (Counterclockwise)
Preceding gene: 83313212
Following gene: 83313210
Centisome position: 90.94
GC content: 68.72
Gene sequence:
>585_bases TTGGATCATGCTCGGCTGGCTGTCCCGTCTGGTTCTGGACAAACGGGCGCGCGAGGCGCTCAAGCGCCCGGCGCCCAAGG CGGCCGCTCGCCCGAATCCGGGCGCGCCCAGGGCCAGGGAGCGCGACCCCGCCACCGCTTTGGCCGAGGCCGAGGAACGC ATGAAGCGCCTGCCGCCGGAAAAGGCCCAGCTGATCCGCTCGGCCATGCTGGTGCACCGGGCGCGGCAATCGGTGCTGGC CGAACTGTCCGACGAGGAGCGGGACAAGCTGGAACAGGTGGCGCGCAAGGCGCTGCTGGGCGGAGGGTCGTGATGTTCGG CTTCCTCAAATCCCTGTTCGGCGAGGAAAAGCCCAAGCCCAAGGCGAAGCCAAAGCCCAAGGCTGCCGCTCCCCGGCCCT TGCCCCCGGCCAAGGCCGAACCCGGTTCGGACCGTGCCGCCCTGTTGAAGCGCGCCCAGGAGGTCCACCGGGCCAAGCGC AAGATTCTCGACGCCCTGTCGGACGAGGACCGGGCCAAGCTGGTCAGCATGGCCATCCTCACCTTTCTCAACCAGGGCCA AGAGCCCGACGACAAGAAGAGATAG
Upstream 100 bases:
>100_bases CGGCAGTTGATGACCCAGGCGACGGCGCGGCCGCTCGATCCCACGGTGTTCGAGACCCATCTGCGGCGGCGCTACCTGGG CTGAGGGATTTCGGGTAGCA
Downstream 100 bases:
>100_bases CCCGCAACGTGAGCATTTCCCCCGATCCCAAGGCTCTCAGCCAGGGTGTGCTGGCCGGCGAGCGCCGTGCCCTGGCCCGT GCCATCACCCTGATCGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDHARLAVPSGSGQTGARGAQAPGAQGGRSPESGRAQGQGARPRHRFGRGRGTHEAPAAGKGPADPLGHAGAPGAAIGAG RTVRRGAGQAGTGGAQGAAGRRVVMFGFLKSLFGEEKPKPKAKPKPKAAAPRPLPPAKAEPGSDRAALLKRAQEVHRAKR KILDALSDEDRAKLVSMAILTFLNQGQEPDDKKR
Sequences:
>Translated_194_residues MDHARLAVPSGSGQTGARGAQAPGAQGGRSPESGRAQGQGARPRHRFGRGRGTHEAPAAGKGPADPLGHAGAPGAAIGAG RTVRRGAGQAGTGGAQGAAGRRVVMFGFLKSLFGEEKPKPKAKPKPKAAAPRPLPPAKAEPGSDRAALLKRAQEVHRAKR KILDALSDEDRAKLVSMAILTFLNQGQEPDDKKR >Mature_194_residues MDHARLAVPSGSGQTGARGAQAPGAQGGRSPESGRAQGQGARPRHRFGRGRGTHEAPAAGKGPADPLGHAGAPGAAIGAG RTVRRGAGQAGTGGAQGAAGRRVVMFGFLKSLFGEEKPKPKAKPKPKAAAPRPLPPAKAEPGSDRAALLKRAQEVHRAKR KILDALSDEDRAKLVSMAILTFLNQGQEPDDKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19884; Mature: 19884
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHARLAVPSGSGQTGARGAQAPGAQGGRSPESGRAQGQGARPRHRFGRGRGTHEAPAAG CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC KGPADPLGHAGAPGAAIGAGRTVRRGAGQAGTGGAQGAAGRRVVMFGFLKSLFGEEKPKP CCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC KAKPKPKAAAPRPLPPAKAEPGSDRAALLKRAQEVHRAKRKILDALSDEDRAKLVSMAIL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TFLNQGQEPDDKKR HHHHCCCCCCCCCC >Mature Secondary Structure MDHARLAVPSGSGQTGARGAQAPGAQGGRSPESGRAQGQGARPRHRFGRGRGTHEAPAAG CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC KGPADPLGHAGAPGAAIGAGRTVRRGAGQAGTGGAQGAAGRRVVMFGFLKSLFGEEKPKP CCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC KAKPKPKAAAPRPLPPAKAEPGSDRAALLKRAQEVHRAKRKILDALSDEDRAKLVSMAIL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TFLNQGQEPDDKKR HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA