| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313212
Identifier: 83313212
GI number: 83313212
Start: 4517104
End: 4518642
Strand: Reverse
Name: 83313212
Synonym: amb4113
Alternate gene names: NA
Gene position: 4518642-4517104 (Counterclockwise)
Preceding gene: 83313219
Following gene: 83313211
Centisome position: 90.97
GC content: 68.16
Gene sequence:
>1539_bases ATGGTCTATCGTTCCCTCACCCGTCGATACCAAGTGAGTCCCATGAGCACCAATCCGGCCTATGCCACCCTGGAAGCCCG CTTCCGCAAGATGAACTCCGTCGCCGAGGCGCTGTCGGTGCTGTCCTGGGACATGGCGACCATGATGCCCGAAGGTGCCG CCGAGATGCGGGCCGAGCAGGTGGCGACCCTGCGCGGCATCAATCACGAACAGATCACCGCGCCGGACATGGGCGAATTG CTCGATCGCGCGGCGGCCGAGCCGCTGGATGCCTGGCAGGCGGCCAATCTGCGCGAGATGCGCCGCGACTGGATTCATGC CAGCGCTCTGCCCGCCGATCTGGTGGAGGCCCAGGCGCGGGCCGAATCCGCCTGCGAGATGGTCTGGCGCCAGGCCCGCC CGGCGGGGGATTTCAAGGCGGTGCTGCCCGCCCTGAAGGTGCTGCTGGGGCTGGTGCGCGAGGTGGGGCACGTCAAGGCC GAGGCCCTGGGCGTGTCCATCTACGACGCCCTGCTCGACCAGTACGAGCCGCTGGGCCGTGCGGCGGAGATCGATCCGGT CTTCGACCACCTGGAGACGTTCCTGCCCGGCTTCATCGGTGAGGTTCTGGACGCCCAGAACGCCCGCCCGCCGATCATCG AGCCGGACGGCCCCTTCGCCACCGACCGCCAAAAGGCTCTCGGCATCCGTCTGATGGAGGTGCTGGGCTTCGACTTCCGC CACGGTCGCCTGGACGTGTCCCATCACCCGTTCTGCGGCGGCTATCCCGGCGATATCCGGGTCACCACCCGTTATAACGA GGACGATTTCGCCTCGGCCATGATGGGGGTGCTGCACGAGACCGGCCACGCGCTCTACGAGTTCGGCCTGCCGTCCGGCC ATTGGCGCCCTCAGCCGGTGGGCCGGGCGCGCGGCATGGTGGTGCACGAATCCCAATCGCTGCTCATGGAGATGCAGGTC TGCCGCTCCAAGGAGTTCGCCGGCTTCCTCTCGCCGCTGCTGAAAAGCACGTTCGGCGCCGAGGGGCCGGCCTGGGAGCC CGACAACATCTACCGCCGGGGCATCAAGGTCAGCCGGGGGTTCATCCGGGTCGAGGCCGACGAGGTCACCTATCCCGCCC ACGTCATCATCCGCTATCGCCTGGAAAAGGCGCTGATCGAAGGCCGGATGGAGTTGGAGGACCTGCCCGCCGCCTGGAAC GAGGGCTATCAGCGCCTGCTGGGCATCACGCCGCCCGACGACCGGCTGGGCTGCCTGCAGGACATTCACTGGTATGGCGG CGCCTGGGGCTATTTCCCCACCTATACGCTGGGCGCCATGACCGCCGCCCAATTGTTCGACGCCGCCTGCCACGCCGATC CGGCGGTGATGAAGGGTCTGGCCGGGGGCGACTTCCGGCCGCTGCTCGGCTGGCTGCGGGCCAACGTCCATTCCAAGGGC TCGCTGCTGTCCACCCGGCAGTTGATGACCCAGGCGACGGCGCGGCCGCTCGATCCCACGGTGTTCGAGACCCATCTGCG GCGGCGCTACCTGGGCTGA
Upstream 100 bases:
>100_bases GACAGGACGACGGCGAAGCGGGGTTTGGCGGTCATGGCGTGTTCCTTATCCTCGGCTGGGGAAAACTCGGGCGATTATAC GATTCCCCGAAGCAAGGGCC
Downstream 100 bases:
>100_bases GGGATTTCGGGTAGCATTGGATCATGCTCGGCTGGCTGTCCCGTCTGGTTCTGGACAAACGGGCGCGCGAGGCGCTCAAG CGCCCGGCGCCCAAGGCGGC
Product: thermostable carboxypeptidase 1
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQVATLRGINHEQITAPDMGEL LDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQARAESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKA EALGVSIYDALLDQYEPLGRAAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPVGRARGMVVHESQSLLMEMQV CRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRGFIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWN EGYQRLLGITPPDDRLGCLQDIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG SLLSTRQLMTQATARPLDPTVFETHLRRRYLG
Sequences:
>Translated_512_residues MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQVATLRGINHEQITAPDMGEL LDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQARAESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKA EALGVSIYDALLDQYEPLGRAAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPVGRARGMVVHESQSLLMEMQV CRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRGFIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWN EGYQRLLGITPPDDRLGCLQDIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG SLLSTRQLMTQATARPLDPTVFETHLRRRYLG >Mature_512_residues MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQVATLRGINHEQITAPDMGEL LDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQARAESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKA EALGVSIYDALLDQYEPLGRAAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPVGRARGMVVHESQSLLMEMQV CRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRGFIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWN EGYQRLLGITPPDDRLGCLQDIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG SLLSTRQLMTQATARPLDPTVFETHLRRRYLG
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 57066; Mature: 57066
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQ CCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VATLRGINHEQITAPDMGELLDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQAR HHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH AESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKAEALGVSIYDALLDQYEPLGR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCC HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPV CCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCC GRARGMVVHESQSLLMEMQVCRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRG HHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHEECC FIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWNEGYQRLLGITPPDDRLGCLQ EEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH DIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCC SLLSTRQLMTQATARPLDPTVFETHLRRRYLG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVYRSLTRRYQVSPMSTNPAYATLEARFRKMNSVAEALSVLSWDMATMMPEGAAEMRAEQ CCCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VATLRGINHEQITAPDMGELLDRAAAEPLDAWQAANLREMRRDWIHASALPADLVEAQAR HHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH AESACEMVWRQARPAGDFKAVLPALKVLLGLVREVGHVKAEALGVSIYDALLDQYEPLGR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAEIDPVFDHLETFLPGFIGEVLDAQNARPPIIEPDGPFATDRQKALGIRLMEVLGFDFR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCC HGRLDVSHHPFCGGYPGDIRVTTRYNEDDFASAMMGVLHETGHALYEFGLPSGHWRPQPV CCEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCC GRARGMVVHESQSLLMEMQVCRSKEFAGFLSPLLKSTFGAEGPAWEPDNIYRRGIKVSRG HHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHEECC FIRVEADEVTYPAHVIIRYRLEKALIEGRMELEDLPAAWNEGYQRLLGITPPDDRLGCLQ EEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH DIHWYGGAWGYFPTYTLGAMTAAQLFDAACHADPAVMKGLAGGDFRPLLGWLRANVHSKG HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCC SLLSTRQLMTQATARPLDPTVFETHLRRRYLG CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]