| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312677
Identifier: 83312677
GI number: 83312677
Start: 3930690
End: 3931388
Strand: Reverse
Name: 83312677
Synonym: amb3578
Alternate gene names: NA
Gene position: 3931388-3930690 (Counterclockwise)
Preceding gene: 83312679
Following gene: 83312676
Centisome position: 79.15
GC content: 66.24
Gene sequence:
>699_bases ATGACGCAGGCGCTGGACCGCGAGGTGCTGCTGCAATTGCAATTCGCGCCGCTGTTTACCGGGCTGGCGGAGAGGGATGT CCGCCAATTGCTCGAGGGCGCCGAACTGCTGGTCCTGGGCCACGAGCACCTTCTCTACCGCGAGGGAGAGGCGGTGGATC GCTTCTACGTGGTTCTGGACGGCCACGTGGAGCTGTCGCTGGACGTGGACGGCAAGAAGAGCGTGGTCGAAGTGGCGCGG CGCTCCACCGTGCTGGGCGACGCCGCCATGTTCGGGCCCGGGCGTTACATCATGACCGCCCGCGTGTTGACCGGCGCCAC CCTGCTGTCCATTCCGGCCCAGTCCTTCCGCGCCCGCCTGGAAGAGCGCCTGGACATCACGCTGCACATGCTGACCACCA TGAGCTTCCGCCTGCGCATGCTGGTCCGCCAGATCGCCGAGCTGAAGCTGAAGACCACGGCCCAGCGCCTGGGCTCCTTC CTGCTGACCATGACCGAGGCCGAGGAAGGCCGTGCCGAGCTGCGCTTTCCCTATGACAAGAAGCTGGTGGCCGACCAGTT GGGCATGAAGCCGGAAAGCCTGTCGCGGGCGCTCGGCAAGCTGGGGCGGCTGGGCGTCGAATCCCTGCCCGACAATCTGG TGGTCATCGCCGAGGTGGCCACCTTGCGCGAATTCTGCGCCGAAGAAGAGGTGGGATAA
Upstream 100 bases:
>100_bases ATCCGACCTCCGGCAAGGGGCGGCATTTAGGGGCTGGAACAGGCCCGCGCTTCGTCGTACGGTGCCTGCCGGTTGACCGG AGTCACATAAGGAACCGCTT
Downstream 100 bases:
>100_bases GGCCCATGGCACTCAACGCCGCCGAACTGGAACTCGTGGCCCAGGCTCCGCTGCTGGCGGGGCTGTCCTCGGCCGACCTC GCCCTGTTGATGGATGGCGC
Product: cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Activator FtrB; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulator Of Biofilm Formation Fnr Family; Transcription Regulator Protein Crp/Fnr Family; Transcriptional Regulator Dnr; Cyclic AMP Receptor Protein; CRP/FNR-Like Transcriptional Regulator; Transcriptional Regulator DnrS; CRP Family Transcriptional Regulator; Transcriptional Regulator Dnr Type; Transcriptional Activator; DnrE Protein; Regulatory Protein; Fnr-Like Transcriptional Activator; DNR Protein; Transcription Regulator Protein; Fnr-Like Regulatory Protein; FNR-Like Transcriptional Regulator; Transcription Regulator; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Protein Fnr/CRP Family
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVAR RSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSF LLTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG
Sequences:
>Translated_232_residues MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVAR RSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSF LLTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG >Mature_231_residues TQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLDGHVELSLDVDGKKSVVEVARR STVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARLEERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFL LTMTEAEEGRAELRFPYDKKLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25897; Mature: 25765
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCCCEEEEEEEE GHVELSLDVDGKKSVVEVARRSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARL CCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHH EERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFLLTMTEAEEGRAELRFPYDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHH KLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG HHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCC >Mature Secondary Structure TQALDREVLLQLQFAPLFTGLAERDVRQLLEGAELLVLGHEHLLYREGEAVDRFYVVLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHEEECCCCCEEEEEEEE GHVELSLDVDGKKSVVEVARRSTVLGDAAMFGPGRYIMTARVLTGATLLSIPAQSFRARL CCEEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHH EERLDITLHMLTTMSFRLRMLVRQIAELKLKTTAQRLGSFLLTMTEAEEGRAELRFPYDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHH KLVADQLGMKPESLSRALGKLGRLGVESLPDNLVVIAEVATLREFCAEEEVG HHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA