| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312676
Identifier: 83312676
GI number: 83312676
Start: 3929986
End: 3930684
Strand: Reverse
Name: 83312676
Synonym: amb3577
Alternate gene names: NA
Gene position: 3930684-3929986 (Counterclockwise)
Preceding gene: 83312677
Following gene: 83312675
Centisome position: 79.13
GC content: 67.67
Gene sequence:
>699_bases ATGGCACTCAACGCCGCCGAACTGGAACTCGTGGCCCAGGCTCCGCTGCTGGCGGGGCTGTCCTCGGCCGACCTCGCCCT GTTGATGGATGGCGCCCATTCCGCCGCCTATCCCGAGACGGAACTGCTGTTCAGCCAGGGAGACAAGGCCGACCGCTTTT TCATCCTGCTGGAAGGCCGGGTCAACATCTTCGCCCTGACCGAGACCGGCGACCAGTCCATCATCGAGGTGTTCGACCCC ATCGTCTCCTTCGCCGAGGCCGCCATCTTCTCGTCGGGCATCTTTCCGCTGAACGGCGAGGTGATGGCCGGCTCGCGGCT GGTGCACGTGCCGGCTGCGCAATTCCTCAAGCGTCTGGCCGACAACCGCTCGCTGGGGCCGATGCTGCTGGGCGGCCTGT CCCAGTGGCAATTCCGTCTGATCCACGAGATCAGCGAACTGAAAAGCAAGTCGCCCGGCCAGCGTCTGGCCACCTTCCTG CTGGCCCTGGCCGCCAAGGCGGGGGCCGACGCCGCCGGCCGCGTGCGCCTGCCGCTGACCAAGGCGGTGCTGGCCAGCCG GATCGGCATCGCGCCGGAAAGCCTGTCGCGCGCCCTCAACCGCCTCAAGGCCTATGGCGTCGATACCCATGGCCGCGAGG TGGAGATCACCGATGTGGAGGCACTCCGCCGCATGGTCCGCGAGGGAAGCGGGGAGTAG
Upstream 100 bases:
>100_bases GGCGGCTGGGCGTCGAATCCCTGCCCGACAATCTGGTGGTCATCGCCGAGGTGGCCACCTTGCGCGAATTCTGCGCCGAA GAAGAGGTGGGATAAGGCCC
Downstream 100 bases:
>100_bases CGGGGCGTTCCGTCACCGTCTTAAATGCATCCAATCCGCACAGAAGTTGTCGGCTTAACAAACGTCAAGGCGGCACTCCG GGCGGACGGGCAGCTTTGCA
Product: cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Regulator Of Biofilm Formation Fnr Family; Crp Family Transcriptional Regulator; Transcriptional Activator FtrB; Transcriptional Activator; DnrE Protein; Regulatory Protein; DNR Protein; Transcription Regulator Protein; FNR-Like Transcriptional Regulator; Transcription Regulator; CAMP-Bindin Transcriptional Regulator; Transcriptional Regulator Dnr; Transcriptional Regulator Dnr/Nnr Type
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MALNAAELELVAQAPLLAGLSSADLALLMDGAHSAAYPETELLFSQGDKADRFFILLEGRVNIFALTETGDQSIIEVFDP IVSFAEAAIFSSGIFPLNGEVMAGSRLVHVPAAQFLKRLADNRSLGPMLLGGLSQWQFRLIHEISELKSKSPGQRLATFL LALAAKAGADAAGRVRLPLTKAVLASRIGIAPESLSRALNRLKAYGVDTHGREVEITDVEALRRMVREGSGE
Sequences:
>Translated_232_residues MALNAAELELVAQAPLLAGLSSADLALLMDGAHSAAYPETELLFSQGDKADRFFILLEGRVNIFALTETGDQSIIEVFDP IVSFAEAAIFSSGIFPLNGEVMAGSRLVHVPAAQFLKRLADNRSLGPMLLGGLSQWQFRLIHEISELKSKSPGQRLATFL LALAAKAGADAAGRVRLPLTKAVLASRIGIAPESLSRALNRLKAYGVDTHGREVEITDVEALRRMVREGSGE >Mature_231_residues ALNAAELELVAQAPLLAGLSSADLALLMDGAHSAAYPETELLFSQGDKADRFFILLEGRVNIFALTETGDQSIIEVFDPI VSFAEAAIFSSGIFPLNGEVMAGSRLVHVPAAQFLKRLADNRSLGPMLLGGLSQWQFRLIHEISELKSKSPGQRLATFLL ALAAKAGADAAGRVRLPLTKAVLASRIGIAPESLSRALNRLKAYGVDTHGREVEITDVEALRRMVREGSGE
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24821; Mature: 24690
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNAAELELVAQAPLLAGLSSADLALLMDGAHSAAYPETELLFSQGDKADRFFILLEGR CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEEEECC VNIFALTETGDQSIIEVFDPIVSFAEAAIFSSGIFPLNGEVMAGSRLVHVPAAQFLKRLA EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEEECCHHHHHHHHH DNRSLGPMLLGGLSQWQFRLIHEISELKSKSPGQRLATFLLALAAKAGADAAGRVRLPLT CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHH KAVLASRIGIAPESLSRALNRLKAYGVDTHGREVEITDVEALRRMVREGSGE HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCC >Mature Secondary Structure ALNAAELELVAQAPLLAGLSSADLALLMDGAHSAAYPETELLFSQGDKADRFFILLEGR CCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEEEECC VNIFALTETGDQSIIEVFDPIVSFAEAAIFSSGIFPLNGEVMAGSRLVHVPAAQFLKRLA EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEEECCHHHHHHHHH DNRSLGPMLLGGLSQWQFRLIHEISELKSKSPGQRLATFLLALAAKAGADAAGRVRLPLT CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHH KAVLASRIGIAPESLSRALNRLKAYGVDTHGREVEITDVEALRRMVREGSGE HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA