Click here to switch to the map view.

The map label for this gene is 83312679

Identifier: 83312679

GI number: 83312679

Start: 3932481

End: 3932678

Strand: Reverse

Name: 83312679

Synonym: amb3580

Alternate gene names: NA

Gene position: 3932678-3932481 (Counterclockwise)

Preceding gene: 83312680

Following gene: 83312677

Centisome position: 79.17

GC content: 68.69

Gene sequence:

>198_bases
ATGAGCGACGTCGACGCCCTCAAGGCCGAGGTCAAGAAGCTGAACGCCCAGGCGACCCAGGCCAAGATGGACCTGCACGA
CCTGTCCGAGGAACTGCCCATCGGCTGGGAGAAGATCCCGGACGTGGCGGCGTCCTGCCACGATCTCTATGCCCGCCTGA
CCCAGGCCCGCGCCGCGCTGAAGGCGGCGGGGGGCTGA

Upstream 100 bases:

>100_bases
GACGCAGGCCAGACCTACCGTCTCGCCGGTTGATGGGGCGGGTGGGGCAAGGCTACACTCGGCCTGCCGCCACGCCCCTC
AAGACCGGAGTATTCCCCCC

Downstream 100 bases:

>100_bases
GCGCGGTTTTCTTGTCATCCCGAACGCAGTGAGGGATCTCCGCCTGGACCGACGGTGCCGAATCGAACCCACCGGATCAG
GATGAGATCCCTCGGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSDVDALKAEVKKLNAQATQAKMDLHDLSEELPIGWEKIPDVAASCHDLYARLTQARAALKAAGG

Sequences:

>Translated_65_residues
MSDVDALKAEVKKLNAQATQAKMDLHDLSEELPIGWEKIPDVAASCHDLYARLTQARAALKAAGG
>Mature_64_residues
SDVDALKAEVKKLNAQATQAKMDLHDLSEELPIGWEKIPDVAASCHDLYARLTQARAALKAAGG

Specific function: Unknown

COG id: COG5420

COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0437 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007774 [H]

Pfam domain/function: PF05082 DUF683 [H]

EC number: NA

Molecular weight: Translated: 6976; Mature: 6845

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVDALKAEVKKLNAQATQAKMDLHDLSEELPIGWEKIPDVAASCHDLYARLTQARAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAAGG
HHCCC
>Mature Secondary Structure 
SDVDALKAEVKKLNAQATQAKMDLHDLSEELPIGWEKIPDVAASCHDLYARLTQARAAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KAAGG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]