Click here to switch to the map view.

The map label for this gene is omp16 [H]

Identifier: 83312309

GI number: 83312309

Start: 3477944

End: 3478429

Strand: Reverse

Name: omp16 [H]

Synonym: amb3210

Alternate gene names: 83312309

Gene position: 3478429-3477944 (Counterclockwise)

Preceding gene: 83312310

Following gene: 83312308

Centisome position: 70.03

GC content: 63.99

Gene sequence:

>486_bases
ATGAAACTGCGTTTCCTGACCATCGTTGCCGCCGCCGCTCTGCTGGCCGCTTGCGAATCCGCTCCTTCTGACACCGGTAA
CACGGGTGGCACTGGCCAGACCACTCCGGCCGTCAGCTCCGGTATCGTCAAGGGCTCGAAGGAAGACTTCGTCGCCAACG
TCGGTGACCGTGTGTTCTTCGACTTCGACAAGTCCAGCCTCCGCGCTGACGCCAAGGCCACCCTGGACAAGCAGGCTGCC
TGGCTGAAGGCCTATCCGAACTACTCGCTGACCGTCGAAGGTCATGCCGACGAGCGCGGCACCCGTGAGTACAACCTGGC
TCTGGGCGAGAAGCGTGCCAACGCCGTGGCTTCCTACCTGAAGTCTGCCGGCATTGCCGCCGCTCGCGTCAAGACCGTCT
CCTACGGCAAGGAGCGCCCCGTCGCTCTGGGCTCGAACGAGGCCGCCTGGTCGCAGAACCGTCGTGGCGTGACCGTCCTG
AACTAA

Upstream 100 bases:

>100_bases
TGTCACTGGTGGGGCGTGTCGTCCTTGATTGGGCGGCGCGTAGTCTCTAAGGTCCGATCTTATTCCATTCCCGCGTCGCA
TTGAGGGGGAGTCCTCAAAT

Downstream 100 bases:

>100_bases
TCAGGCCGTTTACGGACGAAAAGAATGGGGCGCCCGCCCCCTGCTTCGGCAGGGGCGGGCGCCTTATTTTTGCCTGAATC
GTGCTTGATGCTTTCTCACT

Product: Outer membrane protein and related peptidoglycan-associated lipo protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFFDFDKSSLRADAKATLDKQAA
WLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYLKSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVL
N

Sequences:

>Translated_161_residues
MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFFDFDKSSLRADAKATLDKQAA
WLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYLKSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVL
N
>Mature_161_residues
MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFFDFDKSSLRADAKATLDKQAA
WLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYLKSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVL
N

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=102, Percent_Identity=55.8823529411765, Blast_Score=129, Evalue=8e-32,
Organism=Escherichia coli, GI48994946, Length=110, Percent_Identity=33.6363636363636, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 16986; Mature: 16986

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00211 ABC_TRANSPORTER_1 ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCEEEE
DFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYL
ECCHHHHCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHH
KSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVLN
HHCCCHHHHEEHHHCCCCCCEEECCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFF
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCEEEE
DFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYL
ECCHHHHCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHH
KSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVLN
HHCCCHHHHEEHHHCCCCCCEEECCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]