| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312032
Identifier: 83312032
GI number: 83312032
Start: 3130883
End: 3133327
Strand: Reverse
Name: 83312032
Synonym: amb2933
Alternate gene names: NA
Gene position: 3133327-3130883 (Counterclockwise)
Preceding gene: 83312033
Following gene: 83312031
Centisome position: 63.08
GC content: 67.32
Gene sequence:
>2445_bases ATGAAAGCCCTGCTGACCGCCATGGAGCGGTGGACTCTGGGCCGAAAGCTGGTGTTGGGCTCTCTGATCACCATGGTCAT CGTCATCGGTGTGGGTGTGTTTGGGGTCTCGAGCCAGCTTCGCCTCAGCCGGAGCATGGAATTGCTGGCTGGCGCGGGGG TGCGGGTGGCTTTGAGCATCAAGGGCCTCCAGGCGGATTACGCCGTGATCGGCCGTGCGCTTCGCCAGGCCATCCTGGCA GCCGACGCGCCCGCCCGCCAGGAGGCCCTTCGCCAGCTCGAGGACGCCCGCAAGCGGATCCGCAAGACCGGCGCGGAAAT CCGCCCCAGGTTGCTGAAGAAAGAAAACGGTGAACTGATCGACCGCTTCGAGCGGCTTTATGTCGCCTATGGCGTGCTGG TGGACCGGGCGCTGTCTCGCCTGGAGCAGGGGCGGGAGGACGAGGCCCGGGCCCTGGTAGGCTCAGCCGAGTTCCAGCAT GCCGGTGCCGCCGTCGAGCAGTTGCTGGTCCAAGGGGCAGAGATCAGTGATGCCAACCTCGATGCGGCGGCGCACGATGC CGTGGCTTCGGCCATGGCCAGCCTCTGGCTGTTCGCGGCGTTGCTGGTGTGTGGTGTGGCGGTCGCCCTGGGCGCCAGCC GTCTGATCGGGCGCTCCATCCGCCTGCCGCTGTTCCGGCTCCGGGATTCCGTCGCGGAGATGGCGCAGGGCAATTTGGAT CGGTCGCTGCCCTTTGCCGATTATCCCAACGAATTTGGGGAGTTGTCCCGGGCCATCGGCGTGCTGCAGGCGGAAGCCCG GCGCATGGGAGCGCAACGTTGGATCAAGACCAATCAGGCCGCCATTCAGGCCGAACTGCAGACGGCGGAATCCCTTCCCG TCCTGGCCCGCAACTTCCTGGCCGCCATCGCGCCGCTGCTGAATGTGGGACGTGGCGTGTTCTATGTCTGGGAGGAGGAG GAGCGCCATCTGCGTCTGCTGGGCAGCTATGCCCATCTCGAGCGCAAATCGGTCCACCAGACCTTCCGGCTGGGCCAGGG GGTGGTGGGGCAATGCGCCTTGGAACGTCAGCCCATCGTCATCACCGACCCGCCCGAGGATTATGTCCATATCGGCTCCG CTCTGGGCGAAGCGCCGCCGCGTGTCATCGCGGCTCTGCCGGTGCTGCATAACGCGAGACTCATGGCCGTGGTGGAACTG GCGGCCTTCGATCGCTTCGGTCCCGATCAGGAGGCTCTGCTGGAAGGAATTCTGCCCGCCCTGGCCATGACCATGGAAAT CCTCGGCCGGACGGTCAAGACCCGGGACCTGCTGGACGAGACCCGGCGTCAGGCCGAAAGCATGGAAAAGCAGGCCGCCC GCCTGGAGGAACAGGCCGTCGAACTGGAGGCGCAGCAGACCGAGATCCGTGCCACCGAGGCCTGGTATCGCGGCATTATC GAGGCGGCGCCCGACGGCATGCTGGTGATCGATGATCGTGGAATGATCATCCTGATCAATCCCCAAGCTGAAGCCATGTT CGGCCATGGGAGCGGCGAATTGACCGGGCGGCCCGTCGAGCCCCTGATTCCCGCCCTGATGCGGCAGGACTATGGGACAC GGCAGGGGCACCGGCTACAGGGCGTCCGGAGGGACGACACCGTCTTTCCGCTAGTGGCTGGCCTGTCCCGCTTGCCCACC ATCGGTGGCCACGGCGGGTGCATCTGCGTATCCCTTCGCGAGATTGTCGTGGGGGAGGTGCCGGCCCCTGAGCCGTGGCC GGGGGCTGCCCCCCCTCTGCCCGAGCCCATCGCACCCGCGCCAGAGCCGGCCCCTGAGACCAAGCCGGCCCCTGAAGCCA TGCCGGCGGCTCGGTCTGCCGATGCCCTTCCCGATCTGCCCGGCATCGATGTGAAGGCGGGCTTGGCGACCATGGCCAAC AAGCTGTCGCTCTACACCCGGATGCTGATCAAGTTCCGGGAGGGGCAGGGGCGATTCGCCGAGCTTTTCGCCGCCGCCCA GGCTGATTCCGATCCGTCCGCCGCCACCCGGGCCGCCCATACGCTGAAGGGCACCGCCGGGAATATCGGCGCCAAGGGCC TGCAAGCCGCGGCGGCCGCGTTGGAACATGCCTGCAAGGAGGGAGGCCCGCAGGACGAGATCGAGGTCCTGCTGTCCAAC ACCCTGGCCGAACTGGAGCCGGTCATGGCGGGCCTGCGCCGCCTGGAGGGGGCGGAGCCGTCCACGGCCCCCGCCATCTC CGACGCCGAGGTGTGGGTGGCCCTGGGCAAGCTGGCGGCATTGCTGGAAGACAGCGATTCCGAGGCGGGCGACCTGCTGG AAGGGCTGCTGCCCAAGCTGGCGGGCACCGCGCTGGCCACCGCCTTGCAACCGGTGGCCAAGGCCATTGACGATTGCGAC CTGGACGAAGCCCTGGTGCAGCTCGGGAAGGTCAAGGTCCCATGA
Upstream 100 bases:
>100_bases TGTATTTCCTATCGGGCTTCGCCGACCCCAATGGCTTGCCCGGTGGTCTTGTCGGGGCGTTCGTCGACCTCAGCGCCATC AGTCGGTCAGGAGGGGCTCC
Downstream 100 bases:
>100_bases CGGCGCCGCTTTACGTGGCGGGAATCGGCGCATCGGCCGGCGGGTTGGAGGCCATGCTGCTGATGTTCGCCCGGCTGCGC CCCACCGGGCGCATCGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Two-Component System Sensor Kinase; Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Signal Transduction Histidine Kinase; Two-Component System Sensory Histidine Kinase; Sensor Histidine Kinase; Histidine Kinase; Histidine Kinase Hamp Region Domain Protein; Pas Sensor Protein; Gaf Domain Protein; Sensory Histidine Kinase; Hybrid Signal Transduction Histidine Kinase J; Response Regulator Receiver Domain Protein; Pas/Pac Sensor Protein; Sensor Histidine Kinase/Response Regulator Fusion Protein; Sensor Histidine Kinase/Respose Regulator; Complex Regulator Protein; Sensor Kinase; Sensory Box Histidine Kinase/Response Regulator; Hybrid Sensory Kinase; Methyl-Accepting Chemotaxis Protein; Two-Component System Sensory/Regulatory Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Sensor Protein BarA; Sensor Protein GacS; Integral Membrane Sensor Hybrid Histidine Kinase; Two Component System Histidine Kinase; Two-Component Sensor Histidine Kinase/Response Regulator; PAS Fold Family Protein; Histidine Protein Kinase; Histidine Kinase/Response Regulator Hybrid Protein; Histidine Kinase Hybrid
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD LDEALVQLGKVKVP
Sequences:
>Translated_814_residues MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD LDEALVQLGKVKVP >Mature_814_residues MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSIKGLQADYAVIGRALRQAILA ADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELIDRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQH AGAAVEQLLVQGAEISDANLDAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFLAAIAPLLNVGRGVFYVWEEE ERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIVITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVEL AAFDRFGPDQEALLEGILPALAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQGVRRDDTVFPLVAGLSRLPT IGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPAPEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMAN KLSLYTRMLIKFREGQGRFAELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKLAGTALATALQPVAKAIDDCD LDEALVQLGKVKVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87114; Mature: 87114
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50885 HAMP ; PS50894 HPT ; PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE KGLQADYAVIGRALRQAILAADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH DRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQHAGAAVEQLLVQGAEISDANL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC DAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCC RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAIAPLLNVGRGVFYVWEEEERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIV HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEE ITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVELAAFDRFGPDQEALLEGILPA EECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQ HCCCCCEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHC GVRRDDTVFPLVAGLSRLPTIGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPA CCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMANKLSLYTRMLIKFREGQGRFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AGTALATALQPVAKAIDDCDLDEALVQLGKVKVP HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKALLTAMERWTLGRKLVLGSLITMVIVIGVGVFGVSSQLRLSRSMELLAGAGVRVALSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEE KGLQADYAVIGRALRQAILAADAPARQEALRQLEDARKRIRKTGAEIRPRLLKKENGELI CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH DRFERLYVAYGVLVDRALSRLEQGREDEARALVGSAEFQHAGAAVEQLLVQGAEISDANL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC DAAAHDAVASAMASLWLFAALLVCGVAVALGASRLIGRSIRLPLFRLRDSVAEMAQGNLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCC RSLPFADYPNEFGELSRAIGVLQAEARRMGAQRWIKTNQAAIQAELQTAESLPVLARNFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAIAPLLNVGRGVFYVWEEEERHLRLLGSYAHLERKSVHQTFRLGQGVVGQCALERQPIV HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEE ITDPPEDYVHIGSALGEAPPRVIAALPVLHNARLMAVVELAAFDRFGPDQEALLEGILPA EECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LAMTMEILGRTVKTRDLLDETRRQAESMEKQAARLEEQAVELEAQQTEIRATEAWYRGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAPDGMLVIDDRGMIILINPQAEAMFGHGSGELTGRPVEPLIPALMRQDYGTRQGHRLQ HCCCCCEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHC GVRRDDTVFPLVAGLSRLPTIGGHGGCICVSLREIVVGEVPAPEPWPGAAPPLPEPIAPA CCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PEPAPETKPAPEAMPAARSADALPDLPGIDVKAGLATMANKLSLYTRMLIKFREGQGRFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELFAAAQADSDPSAATRAAHTLKGTAGNIGAKGLQAAAAALEHACKEGGPQDEIEVLLSN HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TLAELEPVMAGLRRLEGAEPSTAPAISDAEVWVALGKLAALLEDSDSEAGDLLEGLLPKL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AGTALATALQPVAKAIDDCDLDEALVQLGKVKVP HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA