| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312033
Identifier: 83312033
GI number: 83312033
Start: 3133324
End: 3135300
Strand: Reverse
Name: 83312033
Synonym: amb2934
Alternate gene names: NA
Gene position: 3135300-3133324 (Counterclockwise)
Preceding gene: 83312038
Following gene: 83312032
Centisome position: 63.12
GC content: 64.85
Gene sequence:
>1977_bases ATGGTTGGTGGGTCTATGGACAGTGTTGGTCGGTTCATTGCACTCAGGCTGAATTTGTCGCGGCTTCTGTTGGCTGCGAT GACCGGCGTCATTGGCTTGTGTTCATTCTTCATTGCAAACGAGGTCAAGGAGCAGGGACGCCTCTCTCTTTTGCAATCCG AGGCGTATCGCCACGGTATCGAGATCATGTCCCAGACCCTCAATGGCAATCTCATGGGGGCGGTTGCGGTCCTTGGACTG CTTGATGGCGAGATCAAGGGCGAGGCCATGGGAGCCGTGCCACCCAACAGCCCCAGAATGGTGGGCATGCTGGGTAGCGT TGCCGGAGCCCATGCCGCGCATGGTGTCTTCCTGGTCGGCCAGGACGGGGTGGTCCACTCTTCGTGGGACAGCAGCGGCC GCCCGTCCACGGGCACCAATGTCAGATTTCGGCCGTATTTCCAGATGGCCATGCAGAGCAAGGAAAATGTCTACGCCGCC GTCAGTCTGGCCCGTGGAGACCGCTCTCTCTACTTCACCGCCCCGATCTTTTCCGATACCACCAGGACTGGGCCGGCCGT CGGGGGGGTGGTGGCGCGGACCGATCTGTCGAAGATCGATGCCATGCTGCGCGACAAGGCGGATATCAGCCTGCTTCTGT CGCCCCAGGGCGTGGTCTTTGCCGGCAGTCGCGGCGAATGGATCGGCTTTCTGGCCGAGCGGCCCAGTGCCGCCGATCTT GCCGCCATTCGGGATCTGAAGCAGTTCGGGGCCATGTTCGAGACGGCCGAGCCTTCGATCCTGCCCTTTTCCACGCGAGA GGGGCGCGTGCGACTTGATGGCCGGAGCTATGCCGTGGCCAGGGCCCGGGTGCAATGGAACGATCCCTTCGGCGATTGGA CCCTGGTGCTGATGGAGGATCTCTCGCGTACGGTGCCCCTGGCCGGCAGCGCCGTCCTTGGCGCCGCTGCGGCCGCTGTG GCCGGGTCCTTGCTGCTCGCCTTGCTCAATATGCTGCGCAGCCGCCATGCGCAGCAGGTTTCGGCCGATCGGCTGGCGGA GTTCGCCCGGACCCAGCAATCCATGGCCGAGCGCAAGGCGCAACTGGCCGCCGCCGCCATGCGGCTGCAGCAGGCCAAGA CCGTTTCCGACTTGGCCGATTGCTTCCTGCGTGAATCCCGCGCGCTGATCGGGACGCTGCAGGGGCTGGTCTATGTCCGG GCCGGGAGTGGCGGGACAACCATGTCGCTTGCCGCCGGCTATGCGGTCGGCGCGGCCGTGGCGCCGGAGATATCCGACGG CGAGGGATTGCTGGGGGAATGTGCCTGCTCGGGCCGCCTGCGTGTGGTCGTAACCCCCGCCGAGGGGCCGTGGATCATCG AATCGGGGCTTGGGGAGACCCGGCCGGGGGCGGTGATCATGGCCCCGGTCCAACTGAACGACGCGGTGCTGGGCGTGGTG GAGGTCGCCGTGCTCGGGGTTCCCGATGAGGAGGCCACCCAGCAATTCGAGGATCTGGTCCGCATCCTGGCGCTCAACCT GGAACTGGTCCGCCAGCATCAGCGTACCGAGGAGAGGCTGGAAGAGGCCTCGGTGGCTGAGCGGGCCAAGGGGGAGCAAC TGGCTTTCCAGCAGGTGCTGGTGGATGCCATGCCCTACCCTGTGTTTACCCTGGACGCCCACTCACGCTTCCTGGGCGCC AACCGTGCCTTTGAGGTGGCGTTCGGAATCGGCAAGGAGAACCTGACCGGCCGGAGAATGATCGACCTGGAGTTTCTGCC CGAGGCGTCCCGTGCCGTCTTTCAGTCCGAGAGCGAAGAGATCATCGCTGCCATCGGCCGCGGCCGGCGTGACCTGTCCC TCCCTCTTGCTGATGGCAGGACACATGACATCCTGTATTTCCTATCGGGCTTCGCCGACCCCAATGGCTTGCCCGGTGGT CTTGTCGGGGCGTTCGTCGACCTCAGCGCCATCAGTCGGTCAGGAGGGGCTCCATGA
Upstream 100 bases:
>100_bases CGTATGGGTGGGGATGCCGGTTTGTGGATTGCAGTAATATTGTCACGATGTTCCGTGCCGTGAGGTATGGATTCCGGCGA CATATGTGCTGGTGTTGTTC
Downstream 100 bases:
>100_bases AAGCCCTGCTGACCGCCATGGAGCGGTGGACTCTGGGCCGAAAGCTGGTGTTGGGCTCTCTGATCACCATGGTCATCGTC ATCGGTGTGGGTGTGTTTGG
Product: C4-dicarboxylate transport sensor protein dctB
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; C4-Dicarboxylate Transport Sensor Protein DctB; Sensory Box/GGDEF Family Protein; Multi-Sensor Signal Transduction Histidine Kinase; Two-Component Hybrid Sensor And Regulator; PAS Sensor Protein; Composite Two Component Regulatory Protein; Diguanylate Cyclase With PAS/PAC Sensor; Periplasmic Hybrid Histidine Protein Kinase Two-Component; Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Sensory Box/Response Regulator; PAS Domain-Containing Protein; Sensory Box Sensor Histidine Kinase/Response Regulator
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MVGGSMDSVGRFIALRLNLSRLLLAAMTGVIGLCSFFIANEVKEQGRLSLLQSEAYRHGIEIMSQTLNGNLMGAVAVLGL LDGEIKGEAMGAVPPNSPRMVGMLGSVAGAHAAHGVFLVGQDGVVHSSWDSSGRPSTGTNVRFRPYFQMAMQSKENVYAA VSLARGDRSLYFTAPIFSDTTRTGPAVGGVVARTDLSKIDAMLRDKADISLLLSPQGVVFAGSRGEWIGFLAERPSAADL AAIRDLKQFGAMFETAEPSILPFSTREGRVRLDGRSYAVARARVQWNDPFGDWTLVLMEDLSRTVPLAGSAVLGAAAAAV AGSLLLALLNMLRSRHAQQVSADRLAEFARTQQSMAERKAQLAAAAMRLQQAKTVSDLADCFLRESRALIGTLQGLVYVR AGSGGTTMSLAAGYAVGAAVAPEISDGEGLLGECACSGRLRVVVTPAEGPWIIESGLGETRPGAVIMAPVQLNDAVLGVV EVAVLGVPDEEATQQFEDLVRILALNLELVRQHQRTEERLEEASVAERAKGEQLAFQQVLVDAMPYPVFTLDAHSRFLGA NRAFEVAFGIGKENLTGRRMIDLEFLPEASRAVFQSESEEIIAAIGRGRRDLSLPLADGRTHDILYFLSGFADPNGLPGG LVGAFVDLSAISRSGGAP
Sequences:
>Translated_658_residues MVGGSMDSVGRFIALRLNLSRLLLAAMTGVIGLCSFFIANEVKEQGRLSLLQSEAYRHGIEIMSQTLNGNLMGAVAVLGL LDGEIKGEAMGAVPPNSPRMVGMLGSVAGAHAAHGVFLVGQDGVVHSSWDSSGRPSTGTNVRFRPYFQMAMQSKENVYAA VSLARGDRSLYFTAPIFSDTTRTGPAVGGVVARTDLSKIDAMLRDKADISLLLSPQGVVFAGSRGEWIGFLAERPSAADL AAIRDLKQFGAMFETAEPSILPFSTREGRVRLDGRSYAVARARVQWNDPFGDWTLVLMEDLSRTVPLAGSAVLGAAAAAV AGSLLLALLNMLRSRHAQQVSADRLAEFARTQQSMAERKAQLAAAAMRLQQAKTVSDLADCFLRESRALIGTLQGLVYVR AGSGGTTMSLAAGYAVGAAVAPEISDGEGLLGECACSGRLRVVVTPAEGPWIIESGLGETRPGAVIMAPVQLNDAVLGVV EVAVLGVPDEEATQQFEDLVRILALNLELVRQHQRTEERLEEASVAERAKGEQLAFQQVLVDAMPYPVFTLDAHSRFLGA NRAFEVAFGIGKENLTGRRMIDLEFLPEASRAVFQSESEEIIAAIGRGRRDLSLPLADGRTHDILYFLSGFADPNGLPGG LVGAFVDLSAISRSGGAP >Mature_658_residues MVGGSMDSVGRFIALRLNLSRLLLAAMTGVIGLCSFFIANEVKEQGRLSLLQSEAYRHGIEIMSQTLNGNLMGAVAVLGL LDGEIKGEAMGAVPPNSPRMVGMLGSVAGAHAAHGVFLVGQDGVVHSSWDSSGRPSTGTNVRFRPYFQMAMQSKENVYAA VSLARGDRSLYFTAPIFSDTTRTGPAVGGVVARTDLSKIDAMLRDKADISLLLSPQGVVFAGSRGEWIGFLAERPSAADL AAIRDLKQFGAMFETAEPSILPFSTREGRVRLDGRSYAVARARVQWNDPFGDWTLVLMEDLSRTVPLAGSAVLGAAAAAV AGSLLLALLNMLRSRHAQQVSADRLAEFARTQQSMAERKAQLAAAAMRLQQAKTVSDLADCFLRESRALIGTLQGLVYVR AGSGGTTMSLAAGYAVGAAVAPEISDGEGLLGECACSGRLRVVVTPAEGPWIIESGLGETRPGAVIMAPVQLNDAVLGVV EVAVLGVPDEEATQQFEDLVRILALNLELVRQHQRTEERLEEASVAERAKGEQLAFQQVLVDAMPYPVFTLDAHSRFLGA NRAFEVAFGIGKENLTGRRMIDLEFLPEASRAVFQSESEEIIAAIGRGRRDLSLPLADGRTHDILYFLSGFADPNGLPGG LVGAFVDLSAISRSGGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69883; Mature: 69883
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS50112 PAS ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGGSMDSVGRFIALRLNLSRLLLAAMTGVIGLCSFFIANEVKEQGRLSLLQSEAYRHGI CCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIMSQTLNGNLMGAVAVLGLLDGEIKGEAMGAVPPNSPRMVGMLGSVAGAHAAHGVFLVG HHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEE QDGVVHSSWDSSGRPSTGTNVRFRPYFQMAMQSKENVYAAVSLARGDRSLYFTAPIFSDT CCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCC TRTGPAVGGVVARTDLSKIDAMLRDKADISLLLSPQGVVFAGSRGEWIGFLAERPSAADL CCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEEECCCCHHHH AAIRDLKQFGAMFETAEPSILPFSTREGRVRLDGRSYAVARARVQWNDPFGDWTLVLMED HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEEEECCCCCCHHHHHHHH LSRTVPLAGSAVLGAAAAAVAGSLLLALLNMLRSRHAQQVSADRLAEFARTQQSMAERKA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAAAMRLQQAKTVSDLADCFLRESRALIGTLQGLVYVRAGSGGTTMSLAAGYAVGAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHC APEISDGEGLLGECACSGRLRVVVTPAEGPWIIESGLGETRPGAVIMAPVQLNDAVLGVV CCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEEECCHHHHHHH EVAVLGVPDEEATQQFEDLVRILALNLELVRQHQRTEERLEEASVAERAKGEQLAFQQVL HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VDAMPYPVFTLDAHSRFLGANRAFEVAFGIGKENLTGRRMIDLEFLPEASRAVFQSESEE HHHCCCCEEEECCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCHHH IIAAIGRGRRDLSLPLADGRTHDILYFLSGFADPNGLPGGLVGAFVDLSAISRSGGAP HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVGGSMDSVGRFIALRLNLSRLLLAAMTGVIGLCSFFIANEVKEQGRLSLLQSEAYRHGI CCCCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIMSQTLNGNLMGAVAVLGLLDGEIKGEAMGAVPPNSPRMVGMLGSVAGAHAAHGVFLVG HHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEE QDGVVHSSWDSSGRPSTGTNVRFRPYFQMAMQSKENVYAAVSLARGDRSLYFTAPIFSDT CCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCC TRTGPAVGGVVARTDLSKIDAMLRDKADISLLLSPQGVVFAGSRGEWIGFLAERPSAADL CCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEECCCCEEEECCCCCEEEEEECCCCHHHH AAIRDLKQFGAMFETAEPSILPFSTREGRVRLDGRSYAVARARVQWNDPFGDWTLVLMED HHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEEEECCCCCCHHHHHHHH LSRTVPLAGSAVLGAAAAAVAGSLLLALLNMLRSRHAQQVSADRLAEFARTQQSMAERKA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAAAAMRLQQAKTVSDLADCFLRESRALIGTLQGLVYVRAGSGGTTMSLAAGYAVGAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHC APEISDGEGLLGECACSGRLRVVVTPAEGPWIIESGLGETRPGAVIMAPVQLNDAVLGVV CCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEEECCHHHHHHH EVAVLGVPDEEATQQFEDLVRILALNLELVRQHQRTEERLEEASVAERAKGEQLAFQQVL HHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VDAMPYPVFTLDAHSRFLGANRAFEVAFGIGKENLTGRRMIDLEFLPEASRAVFQSESEE HHHCCCCEEEECCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCHHH IIAAIGRGRRDLSLPLADGRTHDILYFLSGFADPNGLPGGLVGAFVDLSAISRSGGAP HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA