| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ccp [H]
Identifier: 83311921
GI number: 83311921
Start: 3012746
End: 3013741
Strand: Reverse
Name: ccp [H]
Synonym: amb2822
Alternate gene names: 83311921
Gene position: 3013741-3012746 (Counterclockwise)
Preceding gene: 83311922
Following gene: 83311918
Centisome position: 60.67
GC content: 63.45
Gene sequence:
>996_bases ATGATCAGACGCATGACGCTTTCGCTCGCCCTTTTGCTGGGCATGCAGGCGCTTGACGCCCAGGCCGCGTCCGAGCCGAT CCAGCCCATCACACCCGCCAAGGTCAAGGATGCCGGCCTGGCCGAGCTGGGCAAGAAGCTCTATTTCGACACCCGCCTGT CCAAGTCGGGCTTCATCTCCTGCAATTCCTGCCACAACCTGTCGCTGGGCGGCACTGACAACCTGAAGACCTCCATCGGC CACAACTGGCAGAAGGGGCCGATCAACGCCCCCACCGTGCTGAACTCCAGCATGAACCTGGCCCAGTTCTGGGACGGCCG CGCCAAGGATCTGAAGGCCCAGGCGGGCGGCCCCATCGCCAATCCGGGCGAGATGGCCTTCACCCATGAACTGGCGGTCG AGGTGCTGCAATCCATTCCCGGTTATGTGGCCGAGTTCAAGAAGGTGTTCGGCAACGACAAGGTGACCATCGACGAGGTC ACCAAGGCTATCGCCGCTTTCGAAGAGACCCTGGTCACCCCCAATTCCCGCTTCGACAAGTGGCTGAAGGGCGACAAGAA GGCCCTGACCAAGGCCGAGTTGGCCGGCTATGCCCTGTTCAAGGATTCCGGCTGCACCGGTTGCCATAACGGCGCGGCGG TGGGCGGCAACTCGTTCCAGAAGATGGGCGTGGTCGAGGCCTACAAGGCCAGCAGCCCGGCCGAGGGCCGGGTGGGCGTG ACCAAGGACGAGGCCGACCGCTTCAACTTCAAGGTCCCGACGCTCCGCAACGTCGAACTGACCTATCCCTACTTCCACGA TGGCGAGGCCGCCACTTTGAAGCAGGCCGTCGACACCATGGGCCGTATCCAGTTGGGCCGCCAGTTTACCGATGACGAGA ACGGCAAGATCGTTGCCTTCCTCAAGTCCCTGACCGGCGACCAGCCCAACTTCAAGCTGCCGATCCTGCCGCCGTCCTCG GACGCCACGCCGCGCCCGGTGCCGTTCGACAAGTAG
Upstream 100 bases:
>100_bases TCGTGCCTCGGGTTCCGCCGGGTGGAGAGAGCCGGCAGGGCGGGGGGAAGTCCCTCCGGGGAGCGGCCACGTTCTGAAAT CCATATCAGGGGAACATGCC
Downstream 100 bases:
>100_bases GCTTTCGCGAACTCGGGCGGCCGGGCGTAGGTCCGGCCGCCTTTTTCGTGGGCGAAGCACAAGGCGGGCTGCTGCCCGCG CCCGCCTGGGGCGATGCCCC
Product: cytochrome c peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIRRMTLSLALLLGMQALDAQAASEPIQPITPAKVKDAGLAELGKKLYFDTRLSKSGFISCNSCHNLSLGGTDNLKTSIG HNWQKGPINAPTVLNSSMNLAQFWDGRAKDLKAQAGGPIANPGEMAFTHELAVEVLQSIPGYVAEFKKVFGNDKVTIDEV TKAIAAFEETLVTPNSRFDKWLKGDKKALTKAELAGYALFKDSGCTGCHNGAAVGGNSFQKMGVVEAYKASSPAEGRVGV TKDEADRFNFKVPTLRNVELTYPYFHDGEAATLKQAVDTMGRIQLGRQFTDDENGKIVAFLKSLTGDQPNFKLPILPPSS DATPRPVPFDK
Sequences:
>Translated_331_residues MIRRMTLSLALLLGMQALDAQAASEPIQPITPAKVKDAGLAELGKKLYFDTRLSKSGFISCNSCHNLSLGGTDNLKTSIG HNWQKGPINAPTVLNSSMNLAQFWDGRAKDLKAQAGGPIANPGEMAFTHELAVEVLQSIPGYVAEFKKVFGNDKVTIDEV TKAIAAFEETLVTPNSRFDKWLKGDKKALTKAELAGYALFKDSGCTGCHNGAAVGGNSFQKMGVVEAYKASSPAEGRVGV TKDEADRFNFKVPTLRNVELTYPYFHDGEAATLKQAVDTMGRIQLGRQFTDDENGKIVAFLKSLTGDQPNFKLPILPPSS DATPRPVPFDK >Mature_331_residues MIRRMTLSLALLLGMQALDAQAASEPIQPITPAKVKDAGLAELGKKLYFDTRLSKSGFISCNSCHNLSLGGTDNLKTSIG HNWQKGPINAPTVLNSSMNLAQFWDGRAKDLKAQAGGPIANPGEMAFTHELAVEVLQSIPGYVAEFKKVFGNDKVTIDEV TKAIAAFEETLVTPNSRFDKWLKGDKKALTKAELAGYALFKDSGCTGCHNGAAVGGNSFQKMGVVEAYKASSPAEGRVGV TKDEADRFNFKVPTLRNVELTYPYFHDGEAATLKQAVDTMGRIQLGRQFTDDENGKIVAFLKSLTGDQPNFKLPILPPSS DATPRPVPFDK
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=287, Percent_Identity=47.0383275261324, Blast_Score=246, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 35740; Mature: 35740
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRMTLSLALLLGMQALDAQAASEPIQPITPAKVKDAGLAELGKKLYFDTRLSKSGFIS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE CNSCHNLSLGGTDNLKTSIGHNWQKGPINAPTVLNSSMNLAQFWDGRAKDLKAQAGGPIA ECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCHHHHHCCHHHHHHHHCCCCCC NPGEMAFTHELAVEVLQSIPGYVAEFKKVFGNDKVTIDEVTKAIAAFEETLVTPNSRFDK CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHHH WLKGDKKALTKAELAGYALFKDSGCTGCHNGAAVGGNSFQKMGVVEAYKASSPAEGRVGV HHCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCCCCCC TKDEADRFNFKVPTLRNVELTYPYFHDGEAATLKQAVDTMGRIQLGRQFTDDENGKIVAF CCCCCCCCEEECCCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE LKSLTGDQPNFKLPILPPSSDATPRPVPFDK EHHHCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MIRRMTLSLALLLGMQALDAQAASEPIQPITPAKVKDAGLAELGKKLYFDTRLSKSGFIS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE CNSCHNLSLGGTDNLKTSIGHNWQKGPINAPTVLNSSMNLAQFWDGRAKDLKAQAGGPIA ECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCHHHHHCCHHHHHHHHCCCCCC NPGEMAFTHELAVEVLQSIPGYVAEFKKVFGNDKVTIDEVTKAIAAFEETLVTPNSRFDK CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCHHHHH WLKGDKKALTKAELAGYALFKDSGCTGCHNGAAVGGNSFQKMGVVEAYKASSPAEGRVGV HHCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCCCCCC TKDEADRFNFKVPTLRNVELTYPYFHDGEAATLKQAVDTMGRIQLGRQFTDDENGKIVAF CCCCCCCCEEECCCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE LKSLTGDQPNFKLPILPPSSDATPRPVPFDK EHHHCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]