Click here to switch to the map view.

The map label for this gene is 83311918

Identifier: 83311918

GI number: 83311918

Start: 3009307

End: 3009954

Strand: Reverse

Name: 83311918

Synonym: amb2819

Alternate gene names: NA

Gene position: 3009954-3009307 (Counterclockwise)

Preceding gene: 83311921

Following gene: 83311915

Centisome position: 60.6

GC content: 70.37

Gene sequence:

>648_bases
TTGGAAATGGAATCGCGTCCGCTCAAGGATGCCTTGGTGACCGCCATGCTGCCCCATGCCGCCTTCGACGGCTGGTCGCG
CCAGACCTTGGAGGTGGCGGCGGCCGAGCTGGACATGGACCCGTCCCTGCTGGCCCGCCTGTTTCCCCGGGGCGCCGTCG
ACGCGGTGTCCCACCTGGTGGAGCACGCCGACCGGACCCTGGAGGCCGATCTGGCAGCAATTGGGCTGGACGGGCGCGGG
GTGGGGGAGAGGGTGTTTCTGGCGGTCAAGCTGCGGCTGGAGCGCTGGGCCGACCACCGCGAGGCCATCCGCCGCGCCAC
CTCGATTCTGGCCTTGCCGCAGAATCTGGCCCTGGCGGCGCGCCTGACCTGGGGCACCGCCGATGCCCTCTGGCTGGCGG
TGGGCGACCGCTCGGCCGATTTCTCCTGGTACACCAAGCGCGCCACCCTGGCGGCGGTCTATTCCGCCACCTTGCTGTAC
TGGCTGGACGACGAGTCGGAGAATTGCGCCGACACCTGGGGCTTCCTGCGGCGCCGTCTCGACGATGTGCGCTCGCTGCC
CCAGATGCGGCAGAAGGTCGAAGGGCTGTTGGGCGGCCGCAAGACCGCCCTTATGCAGCGTTTCCGGGGCGTGGCGCCCC
GGGCCTGA

Upstream 100 bases:

>100_bases
CGTCCGGGGAGGTGGGTTGATAGCACAGTGCTGCCCCCTTGTGAAGGGGTTAGGCGGGTTCTATAACGCGGAAATGATTT
TTGTCCGTCGCCGAGGAGAA

Downstream 100 bases:

>100_bases
TCAGGCGACCGTGTCGATCAGGTTGCCCGACAGCAGCTTGTTCAGATAGGACGCCGTTTCGTTGGAATCGGTGCTGCCCT
TGGTCAGGGTCTTCAGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: RpsU-Divergently Transcribed; COQ9 Family Ubiquinone Biosynthesis Protein; Ubiquinone Biosynthesis Protein; TetR Family Transcriptional Regulator; Rpsu-Divergently Transcribed Protein; Isoleucyl-TRNA Synthetase; COQ9 Domain Containing Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MEMESRPLKDALVTAMLPHAAFDGWSRQTLEVAAAELDMDPSLLARLFPRGAVDAVSHLVEHADRTLEADLAAIGLDGRG
VGERVFLAVKLRLERWADHREAIRRATSILALPQNLALAARLTWGTADALWLAVGDRSADFSWYTKRATLAAVYSATLLY
WLDDESENCADTWGFLRRRLDDVRSLPQMRQKVEGLLGGRKTALMQRFRGVAPRA

Sequences:

>Translated_215_residues
MEMESRPLKDALVTAMLPHAAFDGWSRQTLEVAAAELDMDPSLLARLFPRGAVDAVSHLVEHADRTLEADLAAIGLDGRG
VGERVFLAVKLRLERWADHREAIRRATSILALPQNLALAARLTWGTADALWLAVGDRSADFSWYTKRATLAAVYSATLLY
WLDDESENCADTWGFLRRRLDDVRSLPQMRQKVEGLLGGRKTALMQRFRGVAPRA
>Mature_215_residues
MEMESRPLKDALVTAMLPHAAFDGWSRQTLEVAAAELDMDPSLLARLFPRGAVDAVSHLVEHADRTLEADLAAIGLDGRG
VGERVFLAVKLRLERWADHREAIRRATSILALPQNLALAARLTWGTADALWLAVGDRSADFSWYTKRATLAAVYSATLLY
WLDDESENCADTWGFLRRRLDDVRSLPQMRQKVEGLLGGRKTALMQRFRGVAPRA

Specific function: Unknown

COG id: COG5590

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40789233, Length=210, Percent_Identity=30.4761904761905, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24586344, Length=193, Percent_Identity=33.160621761658, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23968; Mature: 23968

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMESRPLKDALVTAMLPHAAFDGWSRQTLEVAAAELDMDPSLLARLFPRGAVDAVSHLV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
EHADRTLEADLAAIGLDGRGVGERVFLAVKLRLERWADHREAIRRATSILALPQNLALAA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
RLTWGTADALWLAVGDRSADFSWYTKRATLAAVYSATLLYWLDDESENCADTWGFLRRRL
EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH
DDVRSLPQMRQKVEGLLGGRKTALMQRFRGVAPRA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEMESRPLKDALVTAMLPHAAFDGWSRQTLEVAAAELDMDPSLLARLFPRGAVDAVSHLV
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
EHADRTLEADLAAIGLDGRGVGERVFLAVKLRLERWADHREAIRRATSILALPQNLALAA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
RLTWGTADALWLAVGDRSADFSWYTKRATLAAVYSATLLYWLDDESENCADTWGFLRRRL
EEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHH
DDVRSLPQMRQKVEGLLGGRKTALMQRFRGVAPRA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA