| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is cdsA [H]
Identifier: 83311592
GI number: 83311592
Start: 2671253
End: 2672041
Strand: Reverse
Name: cdsA [H]
Synonym: amb2493
Alternate gene names: 83311592
Gene position: 2672041-2671253 (Counterclockwise)
Preceding gene: 83311593
Following gene: 83311591
Centisome position: 53.79
GC content: 69.07
Gene sequence:
>789_bases GTGCTGAAAACCCGCGCCCTGTCCGCCCTGGTAATGGCTCCGCCCGCGCTGCTGGCCGCCTGGGCCGGCGGCTACGCCTT CGGCGCCCTGATCGCCCTGTGCGCCGCCCTGATGTGCTGGGAATGGCACCGCATGCTGAATGGCGCCTTCACCTTGTCGG GCAAGGTCGCCGCTCTCGGCTGTTCCGCCGCGGCGCTGCTGGCGGTGTCGCGACCGGAGATGGGATTGGCCCTGGCCGCG CTGGCGGCGGTGGTTTCGTCGGCACTGGCGGGCGGTGACCGCTCCGGGCGGGGGTGGGCGGCCTTCGGCGCCATCTATGG CGGTGTCCCCTCGGTGGCGCTGGTCTGGCTGCGGGGCGACCCGACCGTTGGAAATGCGGTGATCTGGTGGCTGCTGCTGG TGGTGTGGTCCACCGATATCGGAGCCTATGCCTTCGGTCGTCTGATCGGCGGCCCCAAATTGCTGCCCCTGGTCAGCCCC AAGAAAACCTGGGCTGGACTGATCGGCGGCATGATCTCGGCGGGGCTGGCGGCCTTGCTGGTCGCCCTGGCCGTGGGAGC CGCCGCCGGACTGGCGGTCTTCGCCGCCGGCGCCATAGTGGCGGTGGTTGCACAGATCGGCGATCTGTTCGAGTCCTGGA TTAAGCGGCGTTGCAACGTCAAGGACTCAAGCAATATCATTCCGGGCCATGGCGGCGTGCTGGATCGCGTCGACGGCCTG TTGACCGCCGCCCTGGCGGTGGCGGCACTATCTCTGGCGACCGGCAAGACGGTCCTGGACTGGCAATGA
Upstream 100 bases:
>100_bases ATACGCTGTGGCCAGACTTCGGGCGGCCCGAGTTGGAGGCCGCCATTCGCGACTTCCAGGGTCGCGACCGCCGTTTCGGT ACGGCCAGGTAGCCCGTGTA
Downstream 100 bases:
>100_bases AGGAAATACCATGAGCGGTCGGCGCGGCGTCACCATCCTGGGCTCGACGGGGTCCATCGGCTGCAACACGGTGGATCTGG TCGAACGGAATCCCGATCTT
Product: CDP-diglyceride synthetase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLKTRALSALVMAPPALLAAWAGGYAFGALIALCAALMCWEWHRMLNGAFTLSGKVAALGCSAAALLAVSRPEMGLALAA LAAVVSSALAGGDRSGRGWAAFGAIYGGVPSVALVWLRGDPTVGNAVIWWLLLVVWSTDIGAYAFGRLIGGPKLLPLVSP KKTWAGLIGGMISAGLAALLVALAVGAAAGLAVFAAGAIVAVVAQIGDLFESWIKRRCNVKDSSNIIPGHGGVLDRVDGL LTAALAVAALSLATGKTVLDWQ
Sequences:
>Translated_262_residues MLKTRALSALVMAPPALLAAWAGGYAFGALIALCAALMCWEWHRMLNGAFTLSGKVAALGCSAAALLAVSRPEMGLALAA LAAVVSSALAGGDRSGRGWAAFGAIYGGVPSVALVWLRGDPTVGNAVIWWLLLVVWSTDIGAYAFGRLIGGPKLLPLVSP KKTWAGLIGGMISAGLAALLVALAVGAAAGLAVFAAGAIVAVVAQIGDLFESWIKRRCNVKDSSNIIPGHGGVLDRVDGL LTAALAVAALSLATGKTVLDWQ >Mature_262_residues MLKTRALSALVMAPPALLAAWAGGYAFGALIALCAALMCWEWHRMLNGAFTLSGKVAALGCSAAALLAVSRPEMGLALAA LAAVVSSALAGGDRSGRGWAAFGAIYGGVPSVALVWLRGDPTVGNAVIWWLLLVVWSTDIGAYAFGRLIGGPKLLPLVSP KKTWAGLIGGMISAGLAALLVALAVGAAAGLAVFAAGAIVAVVAQIGDLFESWIKRRCNVKDSSNIIPGHGGVLDRVDGL LTAALAVAALSLATGKTVLDWQ
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=286, Percent_Identity=31.1188811188811, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787677, Length=108, Percent_Identity=40.7407407407407, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 26495; Mature: 26495
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTRALSALVMAPPALLAAWAGGYAFGALIALCAALMCWEWHRMLNGAFTLSGKVAALG CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHH CSAAALLAVSRPEMGLALAALAAVVSSALAGGDRSGRGWAAFGAIYGGVPSVALVWLRGD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHEEEEECCC PTVGNAVIWWLLLVVWSTDIGAYAFGRLIGGPKLLPLVSPKKTWAGLIGGMISAGLAALL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH VALAVGAAAGLAVFAAGAIVAVVAQIGDLFESWIKRRCNVKDSSNIIPGHGGVLDRVDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LTAALAVAALSLATGKTVLDWQ HHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MLKTRALSALVMAPPALLAAWAGGYAFGALIALCAALMCWEWHRMLNGAFTLSGKVAALG CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHH CSAAALLAVSRPEMGLALAALAAVVSSALAGGDRSGRGWAAFGAIYGGVPSVALVWLRGD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHEEEEECCC PTVGNAVIWWLLLVVWSTDIGAYAFGRLIGGPKLLPLVSPKKTWAGLIGGMISAGLAALL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH VALAVGAAAGLAVFAAGAIVAVVAQIGDLFESWIKRRCNVKDSSNIIPGHGGVLDRVDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH LTAALAVAALSLATGKTVLDWQ HHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA