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The map label for this gene is yjiA [H]

Identifier: 83311405

GI number: 83311405

Start: 2508297

End: 2509340

Strand: Reverse

Name: yjiA [H]

Synonym: amb2306

Alternate gene names: 83311405

Gene position: 2509340-2508297 (Counterclockwise)

Preceding gene: 83311406

Following gene: 83311404

Centisome position: 50.52

GC content: 64.85

Gene sequence:

>1044_bases
ATGAGTCTCATCCCCGTCACCGTCCTGACCGGCTTTCTCGGCAGCGGCAAGACGACCCTTCTCAACCACCTTCTGGCCCA
GCCCGGGCTGGCCGACACCGCCGTGCTGATCAACGAGTTCGGCGCCGTGGGGCTGGATCACCTGCTGGTGCGCCAGGTGG
CCGAGGATGTGGTGCTGCTGCAATCGGGCTGCCTGTGCTGCACGGTGCGCGGCGATCTGGTCGAGGGCATGCGCGATCTG
TTCATCAAGCGGGTGCGGGGCGAGATTCCCGAGTTCAACCGCATGATCATCGAGACCACCGGGCTGGCCGACCCCGCCCC
CATCATCCACACCCTGATGAGCGATCCGCTGATCTCGGGCCGCTATAAGCTGGACGGCATCGTCGCCACGGTGGATGCGG
TCAACGGCGAGCGGACTCTCAATGCCCAGGCCGAGGCGGTCAAGCAGGTGGCCGTGGCCGATCGTCTGGTGCTGACCAAG
GCCGACATCGCCGATCCGGTGGCGGTGGAGGTCCTGCGCGCCCGCCTGCGCCGCCTCAATCCCGCAGCCCCTATCATCCT
GGCCATGCAGGGCAAGTTGGACCCCAGCGATATTCTTGACGCTGGCCTGTTCAATCCGGGAAGTAAAATTCCCGATGTGG
CCGGTTGGCTGAACGAAGAGGCCTATCGCGCCCACCAGCATGCCCATCACGACCATCATCACCATCACGACGCCAATCGC
CACGACGCCCATATCCAGGCCTTCGTCTTCACCGCCAGCGAACCGGTCTCCTGGACGGCGCTGGGCTTCGCGCTGGAGCT
GATGATCTCATCGCGGGGCGAAAACCTGCTACGCATCAAGGGCATCGTCAATGCCCGCGAATCCGCCGATCCCCTGGCCA
TTCACGGGGTGCAGCACGTCTTTCATCCGCCGGCCCCCCTGCCCGGCTGGCCCGACGACGATCATCGGACCCGTATCGTC
TTCATCACCCGCGACCTGTCGCGTCAGGCGGTGGAGGACCTGCTGAAGGGTGTGCTGGCGCTTGAGGATAGTGGAACATC
CTGA

Upstream 100 bases:

>100_bases
AGGTGTCTCCCGACGAGCTTTACAAGAAGTAATGAATGGGGTTTGGGGCCCTCGGCCCCAAGCGGGTATGGGCGGCAGCC
CATAAACTGGAGTTGCATGC

Downstream 100 bases:

>100_bases
GTGATATTGGGCTCTCGCCCAAGCCCAGCCGGGGCAAATGCCCCGGACCCCATTTTTATTCATCAATGAAAACAAGGCGG
TGTCACGGCACACTCCGCTG

Product: putative GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSLIPVTVLTGFLGSGKTTLLNHLLAQPGLADTAVLINEFGAVGLDHLLVRQVAEDVVLLQSGCLCCTVRGDLVEGMRDL
FIKRVRGEIPEFNRMIIETTGLADPAPIIHTLMSDPLISGRYKLDGIVATVDAVNGERTLNAQAEAVKQVAVADRLVLTK
ADIADPVAVEVLRARLRRLNPAAPIILAMQGKLDPSDILDAGLFNPGSKIPDVAGWLNEEAYRAHQHAHHDHHHHHDANR
HDAHIQAFVFTASEPVSWTALGFALELMISSRGENLLRIKGIVNARESADPLAIHGVQHVFHPPAPLPGWPDDDHRTRIV
FITRDLSRQAVEDLLKGVLALEDSGTS

Sequences:

>Translated_347_residues
MSLIPVTVLTGFLGSGKTTLLNHLLAQPGLADTAVLINEFGAVGLDHLLVRQVAEDVVLLQSGCLCCTVRGDLVEGMRDL
FIKRVRGEIPEFNRMIIETTGLADPAPIIHTLMSDPLISGRYKLDGIVATVDAVNGERTLNAQAEAVKQVAVADRLVLTK
ADIADPVAVEVLRARLRRLNPAAPIILAMQGKLDPSDILDAGLFNPGSKIPDVAGWLNEEAYRAHQHAHHDHHHHHDANR
HDAHIQAFVFTASEPVSWTALGFALELMISSRGENLLRIKGIVNARESADPLAIHGVQHVFHPPAPLPGWPDDDHRTRIV
FITRDLSRQAVEDLLKGVLALEDSGTS
>Mature_346_residues
SLIPVTVLTGFLGSGKTTLLNHLLAQPGLADTAVLINEFGAVGLDHLLVRQVAEDVVLLQSGCLCCTVRGDLVEGMRDLF
IKRVRGEIPEFNRMIIETTGLADPAPIIHTLMSDPLISGRYKLDGIVATVDAVNGERTLNAQAEAVKQVAVADRLVLTKA
DIADPVAVEVLRARLRRLNPAAPIILAMQGKLDPSDILDAGLFNPGSKIPDVAGWLNEEAYRAHQHAHHDHHHHHDANRH
DAHIQAFVFTASEPVSWTALGFALELMISSRGENLLRIKGIVNARESADPLAIHGVQHVFHPPAPLPGWPDDDHRTRIVF
ITRDLSRQAVEDLLKGVLALEDSGTS

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=357, Percent_Identity=27.7310924369748, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI126722884, Length=357, Percent_Identity=27.4509803921569, Blast_Score=141, Evalue=8e-34,
Organism=Homo sapiens, GI148727351, Length=357, Percent_Identity=27.4509803921569, Blast_Score=138, Evalue=6e-33,
Organism=Homo sapiens, GI146231952, Length=357, Percent_Identity=27.7310924369748, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI223941779, Length=352, Percent_Identity=26.7045454545455, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI223941776, Length=347, Percent_Identity=26.2247838616715, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI119120938, Length=347, Percent_Identity=24.4956772334294, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI87082430, Length=338, Percent_Identity=33.7278106508876, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788499, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324356, Length=389, Percent_Identity=26.9922879177378, Blast_Score=109, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 37694; Mature: 37563

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIPVTVLTGFLGSGKTTLLNHLLAQPGLADTAVLINEFGAVGLDHLLVRQVAEDVVLL
CCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QSGCLCCTVRGDLVEGMRDLFIKRVRGEIPEFNRMIIETTGLADPAPIIHTLMSDPLISG
HCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC
RYKLDGIVATVDAVNGERTLNAQAEAVKQVAVADRLVLTKADIADPVAVEVLRARLRRLN
CEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCC
PAAPIILAMQGKLDPSDILDAGLFNPGSKIPDVAGWLNEEAYRAHQHAHHDHHHHHDANR
CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HDAHIQAFVFTASEPVSWTALGFALELMISSRGENLLRIKGIVNARESADPLAIHGVQHV
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCEEHHHHHH
FHPPAPLPGWPDDDHRTRIVFITRDLSRQAVEDLLKGVLALEDSGTS
CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLIPVTVLTGFLGSGKTTLLNHLLAQPGLADTAVLINEFGAVGLDHLLVRQVAEDVVLL
CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QSGCLCCTVRGDLVEGMRDLFIKRVRGEIPEFNRMIIETTGLADPAPIIHTLMSDPLISG
HCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCC
RYKLDGIVATVDAVNGERTLNAQAEAVKQVAVADRLVLTKADIADPVAVEVLRARLRRLN
CEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCC
PAAPIILAMQGKLDPSDILDAGLFNPGSKIPDVAGWLNEEAYRAHQHAHHDHHHHHDANR
CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HDAHIQAFVFTASEPVSWTALGFALELMISSRGENLLRIKGIVNARESADPLAIHGVQHV
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCEEHHHHHH
FHPPAPLPGWPDDDHRTRIVFITRDLSRQAVEDLLKGVLALEDSGTS
CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]