| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83311404
Identifier: 83311404
GI number: 83311404
Start: 2507674
End: 2508024
Strand: Reverse
Name: 83311404
Synonym: amb2305
Alternate gene names: NA
Gene position: 2508024-2507674 (Counterclockwise)
Preceding gene: 83311405
Following gene: 83311401
Centisome position: 50.49
GC content: 60.97
Gene sequence:
>351_bases TTGCCTATGTCCTTGGTATGCGGTATAGTGTGGCTACTATACTTATGCGCCCGGACACGAGCGATACAACGCCGCCTATT TGGCGATATGATGTCGCGACGATCCTCCTTTCGGGAGATAGCCATGGGCCGCGGCCTCGATTGCACCTGCCTGCAAGGGC TTGAACTGGCGATGAAATGGGCGGGCCGCCACAGCGACCCGGAACTGGTCCGCTGCACTGCCTCGGTGGTCCACGAATGC CTTCACCGCGATGACTGCGAGCAGCGCGGCGAATGCGACATCCGCCTGCACCAGATCGACGCCTGGCTGGCCGAACATGC CAAACCCACGGCCGCAAAGCGGGTGAATTAG
Upstream 100 bases:
>100_bases GCTGCTTGTTAGTCTTATTCCAGATGTTGGCCTCCCCCGAGGTCAGCCTCCCTCTCTAAGCAACTTCCACCGCCCCGACC CATGGTTCGGGGCGGATTTT
Downstream 100 bases:
>100_bases ACGCGCTTCACCGGAGCGGCCCGCGTCAGGCTTAAGAAGCCCAAGCCCCCTCGCCCCTTTTTCCCTTTTACCGCCCTCTC CCAACGACAACGGCCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPMSLVCGIVWLLYLCARTRAIQRRLFGDMMSRRSSFREIAMGRGLDCTCLQGLELAMKWAGRHSDPELVRCTASVVHEC LHRDDCEQRGECDIRLHQIDAWLAEHAKPTAAKRVN
Sequences:
>Translated_116_residues MPMSLVCGIVWLLYLCARTRAIQRRLFGDMMSRRSSFREIAMGRGLDCTCLQGLELAMKWAGRHSDPELVRCTASVVHEC LHRDDCEQRGECDIRLHQIDAWLAEHAKPTAAKRVN >Mature_115_residues PMSLVCGIVWLLYLCARTRAIQRRLFGDMMSRRSSFREIAMGRGLDCTCLQGLELAMKWAGRHSDPELVRCTASVVHECL HRDDCEQRGECDIRLHQIDAWLAEHAKPTAAKRVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13271; Mature: 13139
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSLVCGIVWLLYLCARTRAIQRRLFGDMMSRRSSFREIAMGRGLDCTCLQGLELAMKW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGRHSDPELVRCTASVVHECLHRDDCEQRGECDIRLHQIDAWLAEHAKPTAAKRVN HCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure PMSLVCGIVWLLYLCARTRAIQRRLFGDMMSRRSSFREIAMGRGLDCTCLQGLELAMKW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AGRHSDPELVRCTASVVHECLHRDDCEQRGECDIRLHQIDAWLAEHAKPTAAKRVN HCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA