Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is ydjC [C]

Identifier: 83311380

GI number: 83311380

Start: 2481900

End: 2482637

Strand: Reverse

Name: ydjC [C]

Synonym: amb2281

Alternate gene names: 83311380

Gene position: 2482637-2481900 (Counterclockwise)

Preceding gene: 83311381

Following gene: 83311379

Centisome position: 49.98

GC content: 69.38

Gene sequence:

>738_bases
ATGACCGGCTCGGCCCATTGGCCGGACGAAGCCCGGCTGCTGAAGCTGCTGCAAGGCCGGGCAGAGTTCGGAGTGCACCT
GACGCTCACCGATCACCGGCCGCTGGGCGCCATGCCCTCCCTGGCCCCCGAGGGACGGCTGCCGCCCATCGGGGCCATGG
TCAAGCGGTCCGTGCTGCGCCGCCTGGACAAGGTCGAAATCGCCGCCGAGCTGGAGCGGCAGGTGGATGCCTTCGAAGCC
CATATGGGCCGCCCGCCCGACTTCCTCGACGGCCATCATCATGTGCACCAGCTGCCCATCATCCGCGACGTGGTGGTGGA
TCTCTGGCGCCGCCGGCTGAAGGCCCGAGGCGGCTGGGTGCGCTCGTGCTGGGAAAGCCCGCTGACCATCGCCCGACGCG
GCGTCGATCCCATCCGCGCCACCATCATCGCCCTGCTGGGCATCGGCCTGCGCCGGCGCATGCACGCCGAGGGCATCCCC
CACAACCGCAGCTTCCGCGGCGTCTATGACTTCTCCGGCAAGGTCGCCTATGCCGAGCTGTTCCGCATCTTCTCCCAGGC
GCCGGGACCGGGCACCCTGATCATGTGCCACCCGGGCCAGGTGGACGACGCCTTGCGCGCCTGCGAATGGCTGACCGATC
AGCGCGAGGTGGAGTGGAAATTCCTGGCCTCCGATGCCTTTCCCCTATCGCTGGCCGATCGCGGCATCACCCTGGCGGCC
AAGCCGCTGTCGGCATGA

Upstream 100 bases:

>100_bases
CGCCATCACCCTTTGCGCCGACGATTACGGGCTGGCCCCGGGGCTCGGCATCGCCATCCGCGCCCTGATCGAGGACGGAC
GCCTCCAGGCCACCGGCTGC

Downstream 100 bases:

>100_bases
GCCCCACCTCCGCCTCGGCGCGGCTGGGAACCTATTACGCCGCCCTGTTCGTGGCGGTGGGCATTCACATCCCCTTCTGG
CCCCTCTGGCTGCAAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTGSAHWPDEARLLKLLQGRAEFGVHLTLTDHRPLGAMPSLAPEGRLPPIGAMVKRSVLRRLDKVEIAAELERQVDAFEA
HMGRPPDFLDGHHHVHQLPIIRDVVVDLWRRRLKARGGWVRSCWESPLTIARRGVDPIRATIIALLGIGLRRRMHAEGIP
HNRSFRGVYDFSGKVAYAELFRIFSQAPGPGTLIMCHPGQVDDALRACEWLTDQREVEWKFLASDAFPLSLADRGITLAA
KPLSA

Sequences:

>Translated_245_residues
MTGSAHWPDEARLLKLLQGRAEFGVHLTLTDHRPLGAMPSLAPEGRLPPIGAMVKRSVLRRLDKVEIAAELERQVDAFEA
HMGRPPDFLDGHHHVHQLPIIRDVVVDLWRRRLKARGGWVRSCWESPLTIARRGVDPIRATIIALLGIGLRRRMHAEGIP
HNRSFRGVYDFSGKVAYAELFRIFSQAPGPGTLIMCHPGQVDDALRACEWLTDQREVEWKFLASDAFPLSLADRGITLAA
KPLSA
>Mature_244_residues
TGSAHWPDEARLLKLLQGRAEFGVHLTLTDHRPLGAMPSLAPEGRLPPIGAMVKRSVLRRLDKVEIAAELERQVDAFEAH
MGRPPDFLDGHHHVHQLPIIRDVVVDLWRRRLKARGGWVRSCWESPLTIARRGVDPIRATIIALLGIGLRRRMHAEGIPH
NRSFRGVYDFSGKVAYAELFRIFSQAPGPGTLIMCHPGQVDDALRACEWLTDQREVEWKFLASDAFPLSLADRGITLAAK
PLSA

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27440; Mature: 27309

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSAHWPDEARLLKLLQGRAEFGVHLTLTDHRPLGAMPSLAPEGRLPPIGAMVKRSVLR
CCCCCCCCHHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLDKVEIAAELERQVDAFEAHMGRPPDFLDGHHHVHQLPIIRDVVVDLWRRRLKARGGWV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
RSCWESPLTIARRGVDPIRATIIALLGIGLRRRMHAEGIPHNRSFRGVYDFSGKVAYAEL
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH
FRIFSQAPGPGTLIMCHPGQVDDALRACEWLTDQREVEWKFLASDAFPLSLADRGITLAA
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCEEEEC
KPLSA
CCCCC
>Mature Secondary Structure 
TGSAHWPDEARLLKLLQGRAEFGVHLTLTDHRPLGAMPSLAPEGRLPPIGAMVKRSVLR
CCCCCCCHHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RLDKVEIAAELERQVDAFEAHMGRPPDFLDGHHHVHQLPIIRDVVVDLWRRRLKARGGWV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
RSCWESPLTIARRGVDPIRATIIALLGIGLRRRMHAEGIPHNRSFRGVYDFSGKVAYAEL
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHH
FRIFSQAPGPGTLIMCHPGQVDDALRACEWLTDQREVEWKFLASDAFPLSLADRGITLAA
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCEEEEC
KPLSA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA