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The map label for this gene is appC [H]

Identifier: 83311076

GI number: 83311076

Start: 2135520

End: 2136143

Strand: Reverse

Name: appC [H]

Synonym: amb1977

Alternate gene names: 83311076

Gene position: 2136143-2135520 (Counterclockwise)

Preceding gene: 83311077

Following gene: 83311075

Centisome position: 43.01

GC content: 72.12

Gene sequence:

>624_bases
ATGAAGGCCGGGGCCGCCATCCTGTTGCTGTTGCTGGCCGCGATTCTGGCGGCGCCCTGGCTGCTGCCGGCTCCCGAAGC
GCTGGATCTGGCCAGCCGCTTCGAGCCGCCCTCCCTGGTCCACCCGCTGGGCACAGACGATCTCGGCCGCGACATCGGCG
CCCGGCTGGCCCAGGGCGGGCTGATCTCGCTGAGCGTCGCCGCCATCACCGCCCTGCTGGCGGCCTCGATCGGCACGGTG
ATCGGCCTGCTGGCCGGCTATCATGGCGGAAAGGCCGACGCCCTGCTGATGCGCCTCACCGACGGCGTGATGTCGCTGCC
GCTGCTGCCGCTGCTGATCGTGCTGGCTGCCGCCGACCCAGCCAAGCTGGGCGTGCCGCCCGCCATGACGGAGTCGGAAG
TCTTCGCCGTGCTGCGCCCCGCCGTGATCATCGCCTGCGTCGCCTGGACCGGGGTGGCGCGGCTGGTGCGGGCCGCCACG
CTTTCGGTGCGCACCAGGGACTTCGTGCGCGCAGCCGAGGCCATGGGCGCCCGGCCCGGCCGGATCATGCTGCGCCACAT
CCTCCCCAATGTGGCCTCGCCCATGGTGGTGGCACCACCCTGTCGGTGGGCAACATCATCCTGA

Upstream 100 bases:

>100_bases
TGGCCCTGTCGGGCCTGCTGCTGGCCACGGCCATGACCCTGGCAGGCTCGATCCTGGCCGACATGGCCTATCAGCGCCTT
GACCCCAGGATCGGCAAGCC

Downstream 100 bases:

>100_bases
TCGAAAGCGCCCTGTCCTTCCTGGGCCTCGGCATCCGCCCACCCCTGGCGTCATGGGGCAACATGCTGACCGGGGCCATG
GACGTCGTCTGGAGCGCCCC

Product: ABC-type dipeptide/oligopeptide/nickel transport systems

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKAGAAILLLLLAAILAAPWLLPAPEALDLASRFEPPSLVHPLGTDDLGRDIGARLAQGGLISLSVAAITALLAASIGTV
IGLLAGYHGGKADALLMRLTDGVMSLPLLPLLIVLAAADPAKLGVPPAMTESEVFAVLRPAVIIACVAWTGVARLVRAAT
LSVRTRDFVRAAEAMGARPGRIMLRHILPNVASPMVVAPPCRWATSS

Sequences:

>Translated_207_residues
MKAGAAILLLLLAAILAAPWLLPAPEALDLASRFEPPSLVHPLGTDDLGRDIGARLAQGGLISLSVAAITALLAASIGTV
IGLLAGYHGGKADALLMRLTDGVMSLPLLPLLIVLAAADPAKLGVPPAMTESEVFAVLRPAVIIACVAWTGVARLVRAAT
LSVRTRDFVRAAEAMGARPGRIMLRHILPNVASPMVVAPPCRWATSS
>Mature_207_residues
MKAGAAILLLLLAAILAAPWLLPAPEALDLASRFEPPSLVHPLGTDDLGRDIGARLAQGGLISLSVAAITALLAASIGTV
IGLLAGYHGGKADALLMRLTDGVMSLPLLPLLIVLAAADPAKLGVPPAMTESEVFAVLRPAVIIACVAWTGVARLVRAAT
LSVRTRDFVRAAEAMGARPGRIMLRHILPNVASPMVVAPPCRWATSS

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=208, Percent_Identity=35.0961538461538, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787760, Length=194, Percent_Identity=35.5670103092784, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1787498, Length=147, Percent_Identity=37.4149659863946, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788505, Length=156, Percent_Identity=32.6923076923077, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789889, Length=173, Percent_Identity=35.8381502890173, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1789964, Length=163, Percent_Identity=34.3558282208589, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 21305; Mature: 21305

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGAAILLLLLAAILAAPWLLPAPEALDLASRFEPPSLVHPLGTDDLGRDIGARLAQGG
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
LISLSVAAITALLAASIGTVIGLLAGYHGGKADALLMRLTDGVMSLPLLPLLIVLAAADP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKLGVPPAMTESEVFAVLRPAVIIACVAWTGVARLVRAATLSVRTRDFVRAAEAMGARPG
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RIMLRHILPNVASPMVVAPPCRWATSS
HHHHHHHHHHHCCCCEECCCCCCCCCC
>Mature Secondary Structure
MKAGAAILLLLLAAILAAPWLLPAPEALDLASRFEPPSLVHPLGTDDLGRDIGARLAQGG
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
LISLSVAAITALLAASIGTVIGLLAGYHGGKADALLMRLTDGVMSLPLLPLLIVLAAADP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKLGVPPAMTESEVFAVLRPAVIIACVAWTGVARLVRAATLSVRTRDFVRAAEAMGARPG
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RIMLRHILPNVASPMVVAPPCRWATSS
HHHHHHHHHHHCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]