| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is sphX [H]
Identifier: 83310474
GI number: 83310474
Start: 1491883
End: 1492908
Strand: Reverse
Name: sphX [H]
Synonym: amb1375
Alternate gene names: 83310474
Gene position: 1492908-1491883 (Counterclockwise)
Preceding gene: 83310475
Following gene: 83310473
Centisome position: 30.06
GC content: 65.3
Gene sequence:
>1026_bases ATGTCCACCAAGACCCTGGCCGTCGCTGCCGCCGCCCTGGCCGTCATCGCCACCGCCGGCGCGGCGCAAGCCCGCGATCA GATCCGCATCGTCGGGTCGTCGACCGTCTACCCGTTCTCCACCGCCGTGGCCGAGGCCTTCGGCAAGGCGGGCAAGTTCA AGACCCCGGTGGTCGAGAGCACCGGCACCGGCGGCGGCATGCGCCTGTTCTGTTCCGGCGTGGGCGAGAGCTTCCCCGAC ATCACCAACGCCTCGCGCCGCATCGAGCCGTCGGAAGTGGAATTCTGCACCAAGAACGGCGTCACCGGCATCACCGAGGT GGTGATCGGCTATGACGGCATCGTGTTCATGAATTCCAAGGCCGGCCCCGACTTCACGCTGACCCGCGAGCAGATGTACA AGGCCACCGCCAAGGACGTGCCGGTGGGCGGCAAGCTGGTGCCGAACCCCTATAAGAACTGGAGCGACATCGATCCGTCG CTGCCCAAGGAGCCGATCCTGGTCTATGGCCCGGCCCCGAACCACGGCACCCGCGACGCCTATGTGGAACTGGTCCTCGA CCCCGCCTGCGCCAAGCAGCCCGAGCTGAAGGACATGGAAAAGGCCGCCAAGAAGAAGGCCTGCCAGACCGTGCGTGAAG ACGGCGCCTGGGTCGAGGTGTCGGAGAACTACACCGTCATCCAGCAGAAGATCACCTCGAACCCGGCCGCGCTGGGCGTG ATCACCTTCAGCTATCTCGACCAGAACCGCGACAAGGTCAAGGCCGCTCCGGTGGACGGCGTGGTCGCCACCTACGACGC CATCGCCAGCAACAAGTACCCGGTGTCGCGTCCGCTGTTCTTCTACGTCAAGAAGCAGCATGTGGGCATGGTCCCCGGCG TCAAGGAATACGTCACCGAGTTCACCTCGGACAAGGCCTGGGGCAAGGAAGGCTATCTGGCCGACAAGGGCCTGATCGCC TCGCCCGACGCCATCCGCAAGGAGCAGGCGAACAACGCCCGCACCCTGGGTGAACTGAAGATGTGA
Upstream 100 bases:
>100_bases GCTTCATGCTTGTGTCCCCGGACTGTAACACAGCGCCGATAGGATGCCGGCCGAGGGGACTGATGTCTCCCTCGTCCCGT TGCACTCCCCCGGAGGTTTC
Downstream 100 bases:
>100_bases TCGCAAAGGGGGAAGCCATGACGGCTTCCCCCGCTTCTTTTTCCGGGCCGCCCAATCCATGCAGACCGTCACCCTTGCCG CCATCCTGCTGCTGATCTCG
Product: ABC-type phosphate transport system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSTKTLAVAAAALAVIATAGAAQARDQIRIVGSSTVYPFSTAVAEAFGKAGKFKTPVVESTGTGGGMRLFCSGVGESFPD ITNASRRIEPSEVEFCTKNGVTGITEVVIGYDGIVFMNSKAGPDFTLTREQMYKATAKDVPVGGKLVPNPYKNWSDIDPS LPKEPILVYGPAPNHGTRDAYVELVLDPACAKQPELKDMEKAAKKKACQTVREDGAWVEVSENYTVIQQKITSNPAALGV ITFSYLDQNRDKVKAAPVDGVVATYDAIASNKYPVSRPLFFYVKKQHVGMVPGVKEYVTEFTSDKAWGKEGYLADKGLIA SPDAIRKEQANNARTLGELKM
Sequences:
>Translated_341_residues MSTKTLAVAAAALAVIATAGAAQARDQIRIVGSSTVYPFSTAVAEAFGKAGKFKTPVVESTGTGGGMRLFCSGVGESFPD ITNASRRIEPSEVEFCTKNGVTGITEVVIGYDGIVFMNSKAGPDFTLTREQMYKATAKDVPVGGKLVPNPYKNWSDIDPS LPKEPILVYGPAPNHGTRDAYVELVLDPACAKQPELKDMEKAAKKKACQTVREDGAWVEVSENYTVIQQKITSNPAALGV ITFSYLDQNRDKVKAAPVDGVVATYDAIASNKYPVSRPLFFYVKKQHVGMVPGVKEYVTEFTSDKAWGKEGYLADKGLIA SPDAIRKEQANNARTLGELKM >Mature_340_residues STKTLAVAAAALAVIATAGAAQARDQIRIVGSSTVYPFSTAVAEAFGKAGKFKTPVVESTGTGGGMRLFCSGVGESFPDI TNASRRIEPSEVEFCTKNGVTGITEVVIGYDGIVFMNSKAGPDFTLTREQMYKATAKDVPVGGKLVPNPYKNWSDIDPSL PKEPILVYGPAPNHGTRDAYVELVLDPACAKQPELKDMEKAAKKKACQTVREDGAWVEVSENYTVIQQKITSNPAALGVI TFSYLDQNRDKVKAAPVDGVVATYDAIASNKYPVSRPLFFYVKKQHVGMVPGVKEYVTEFTSDKAWGKEGYLADKGLIAS PDAIRKEQANNARTLGELKM
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36631; Mature: 36500
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTLAVAAAALAVIATAGAAQARDQIRIVGSSTVYPFSTAVAEAFGKAGKFKTPVVES CCCHHHHHHHHHHHHHHHCCCHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC TGTGGGMRLFCSGVGESFPDITNASRRIEPSEVEFCTKNGVTGITEVVIGYDGIVFMNSK CCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEECC AGPDFTLTREQMYKATAKDVPVGGKLVPNPYKNWSDIDPSLPKEPILVYGPAPNHGTRDA CCCCEEECHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCE YVELVLDPACAKQPELKDMEKAAKKKACQTVREDGAWVEVSENYTVIQQKITSNPAALGV EEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHHHCCCCCEEEE ITFSYLDQNRDKVKAAPVDGVVATYDAIASNKYPVSRPLFFYVKKQHVGMVPGVKEYVTE EEEEHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH FTSDKAWGKEGYLADKGLIASPDAIRKEQANNARTLGELKM HHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure STKTLAVAAAALAVIATAGAAQARDQIRIVGSSTVYPFSTAVAEAFGKAGKFKTPVVES CCHHHHHHHHHHHHHHHCCCHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC TGTGGGMRLFCSGVGESFPDITNASRRIEPSEVEFCTKNGVTGITEVVIGYDGIVFMNSK CCCCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEEECC AGPDFTLTREQMYKATAKDVPVGGKLVPNPYKNWSDIDPSLPKEPILVYGPAPNHGTRDA CCCCEEECHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCE YVELVLDPACAKQPELKDMEKAAKKKACQTVREDGAWVEVSENYTVIQQKITSNPAALGV EEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHHHCCCCCEEEE ITFSYLDQNRDKVKAAPVDGVVATYDAIASNKYPVSRPLFFYVKKQHVGMVPGVKEYVTE EEEEHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHH FTSDKAWGKEGYLADKGLIASPDAIRKEQANNARTLGELKM HHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]