Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yqgH [H]

Identifier: 83310473

GI number: 83310473

Start: 1490451

End: 1491824

Strand: Reverse

Name: yqgH [H]

Synonym: amb1374

Alternate gene names: 83310473

Gene position: 1491824-1490451 (Counterclockwise)

Preceding gene: 83310474

Following gene: 83310472

Centisome position: 30.03

GC content: 68.41

Gene sequence:

>1374_bases
ATGCAGACCGTCACCCTTGCCGCCATCCTGCTGCTGATCTCGACCCTGGCCTTCCAGCTTGGGCGCAAGCGCGCCTTCGC
CGTCGCCTCGGATCATCCCGGCACCCTTCACTCGCTGCCCGGCTATTACGGCTGGTGGGTGGCCCTGTGGTGCGGCCTGC
CGGCCTTCGCCATCCTGGCCCTGTGGCTGGTTTTCGAGCCCAGCCTGATCCGCGCCCTGGTCATCGCCGACCTGCCGGAG
GCCCTGCGCGCCTTGCCGGCCGAGCGCATCGACGTGATCATCAACGAGGTGCGCAACGCCGCCCTGGGCCACGCCACCGC
CAATCCCGATTTCGCCGCCGCCGCCGAGCACTATAACCGCCTGCAGCAGACCGGCTTTGCCTCCGCCGTGGCGGTGACCG
TCGCCCTGGCCCTGGCCGGCGCCACCTTCGCCTATCGCCGGGTCCACGCCGAGTTGCGCGCCCGGCCGCGGGTCGAGCGC
ACCATCACCGTCTTCCTGGTGGCCAGCTCCACCGTGGCCATCTTCACCACGGTGGGCATCGTGCTGTCGCTGCTGTTCGA
GGCGCTGCGCTTCTTCCACATGGTGGATTTCGTCGACTTCCTGTTCGGCCTGAACTGGAGCCCCCAGATGTCCACCCGCT
CGGACCAGGTGGGCAGCTCCGGAGCCTTCGGCATGGTGCCGCTGCTGACCGGCACCATGCTGATCAGCGCCATCTCCATG
GTGGTCGCCCTGCCGCTGGGCCTGTTCTCGGCCATCTACATGTCGGAATACGCCCAGCCGCGCGTCCGCGCCATCGCCAA
GCCGGCGCTGGAGATCCTGGCCGGCATTCCCACCGTGGTGTTCGGCTTCTTCGCCGTGGTGACGGTGGCCCCGGCCATCC
GCGCCGTCGGCGGCGCCCTCGGCCTCAACGTGGCGGCGGAAAGCGCGCTGGCCGCCGGCTTCGTCATGGGCATCACCCTG
ATCCCGCTGATCTCGTCCCTTTCGGACGACGTCATCACCGCCGTGCCCCAGTCCTTGCGCGAAGGCGCCTTCGGCCTGGG
CGCCACCCGCTCGGAGACCATCGTCCAGGTGGTGTTGCCCGCCGCCCTTCCCGGCATCGTCGGCGGCGTGCTGCTGGCGG
TATCGCGGGCCATCGGCGAGACCATGATCGTGGTCATGGCCGCCGGCCTGTCCGCCAAGCTGACCGCCAACCCGCTGGAG
GCGGTGACCACCGTCACCGTGCAGATCGTCACCCTGCTGGTGGGCGATACCGAGTTCGACAGCCCCAAGACCCTGGCGGC
CTTCGCCCTGGGCCTGATGCTGTTCGGCATCACCTTGGGATTGAACGTCATCGCCTTGCATATCGTTCAGAAGTATCGGG
AAAAGTATGACTGA

Upstream 100 bases:

>100_bases
CAGGCGAACAACGCCCGCACCCTGGGTGAACTGAAGATGTGATCGCAAAGGGGGAAGCCATGACGGCTTCCCCCGCTTCT
TTTTCCGGGCCGCCCAATCC

Downstream 100 bases:

>100_bases
GATGGCAGAGATCACCGTGGCGGCCCGCACCGCCGAAACCGTGGCGGCCCGCCTGGGCCGGCGCTATGCCGCCGAGCGGC
GCTTCCGCATCCTCGGCCTT

Product: ABC-type phosphate transport system

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MQTVTLAAILLLISTLAFQLGRKRAFAVASDHPGTLHSLPGYYGWWVALWCGLPAFAILALWLVFEPSLIRALVIADLPE
ALRALPAERIDVIINEVRNAALGHATANPDFAAAAEHYNRLQQTGFASAVAVTVALALAGATFAYRRVHAELRARPRVER
TITVFLVASSTVAIFTTVGIVLSLLFEALRFFHMVDFVDFLFGLNWSPQMSTRSDQVGSSGAFGMVPLLTGTMLISAISM
VVALPLGLFSAIYMSEYAQPRVRAIAKPALEILAGIPTVVFGFFAVVTVAPAIRAVGGALGLNVAAESALAAGFVMGITL
IPLISSLSDDVITAVPQSLREGAFGLGATRSETIVQVVLPAALPGIVGGVLLAVSRAIGETMIVVMAAGLSAKLTANPLE
AVTTVTVQIVTLLVGDTEFDSPKTLAAFALGLMLFGITLGLNVIALHIVQKYREKYD

Sequences:

>Translated_457_residues
MQTVTLAAILLLISTLAFQLGRKRAFAVASDHPGTLHSLPGYYGWWVALWCGLPAFAILALWLVFEPSLIRALVIADLPE
ALRALPAERIDVIINEVRNAALGHATANPDFAAAAEHYNRLQQTGFASAVAVTVALALAGATFAYRRVHAELRARPRVER
TITVFLVASSTVAIFTTVGIVLSLLFEALRFFHMVDFVDFLFGLNWSPQMSTRSDQVGSSGAFGMVPLLTGTMLISAISM
VVALPLGLFSAIYMSEYAQPRVRAIAKPALEILAGIPTVVFGFFAVVTVAPAIRAVGGALGLNVAAESALAAGFVMGITL
IPLISSLSDDVITAVPQSLREGAFGLGATRSETIVQVVLPAALPGIVGGVLLAVSRAIGETMIVVMAAGLSAKLTANPLE
AVTTVTVQIVTLLVGDTEFDSPKTLAAFALGLMLFGITLGLNVIALHIVQKYREKYD
>Mature_457_residues
MQTVTLAAILLLISTLAFQLGRKRAFAVASDHPGTLHSLPGYYGWWVALWCGLPAFAILALWLVFEPSLIRALVIADLPE
ALRALPAERIDVIINEVRNAALGHATANPDFAAAAEHYNRLQQTGFASAVAVTVALALAGATFAYRRVHAELRARPRVER
TITVFLVASSTVAIFTTVGIVLSLLFEALRFFHMVDFVDFLFGLNWSPQMSTRSDQVGSSGAFGMVPLLTGTMLISAISM
VVALPLGLFSAIYMSEYAQPRVRAIAKPALEILAGIPTVVFGFFAVVTVAPAIRAVGGALGLNVAAESALAAGFVMGITL
IPLISSLSDDVITAVPQSLREGAFGLGATRSETIVQVVLPAALPGIVGGVLLAVSRAIGETMIVVMAAGLSAKLTANPLE
AVTTVTVQIVTLLVGDTEFDSPKTLAAFALGLMLFGITLGLNVIALHIVQKYREKYD

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0573

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790164, Length=257, Percent_Identity=30.3501945525292, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1790163, Length=237, Percent_Identity=24.0506329113924, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011864 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 48236; Mature: 48236

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVTLAAILLLISTLAFQLGRKRAFAVASDHPGTLHSLPGYYGWWVALWCGLPAFAILA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHCCHHHHHHH
LWLVFEPSLIRALVIADLPEALRALPAERIDVIINEVRNAALGHATANPDFAAAAEHYNR
HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LQQTGFASAVAVTVALALAGATFAYRRVHAELRARPRVERTITVFLVASSTVAIFTTVGI
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCHHHHHHHHHH
VLSLLFEALRFFHMVDFVDFLFGLNWSPQMSTRSDQVGSSGAFGMVPLLTGTMLISAISM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VVALPLGLFSAIYMSEYAQPRVRAIAKPALEILAGIPTVVFGFFAVVTVAPAIRAVGGAL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLNVAAESALAAGFVMGITLIPLISSLSDDVITAVPQSLREGAFGLGATRSETIVQVVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AALPGIVGGVLLAVSRAIGETMIVVMAAGLSAKLTANPLEAVTTVTVQIVTLLVGDTEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SPKTLAAFALGLMLFGITLGLNVIALHIVQKYREKYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTVTLAAILLLISTLAFQLGRKRAFAVASDHPGTLHSLPGYYGWWVALWCGLPAFAILA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHCCHHHHHHH
LWLVFEPSLIRALVIADLPEALRALPAERIDVIINEVRNAALGHATANPDFAAAAEHYNR
HHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LQQTGFASAVAVTVALALAGATFAYRRVHAELRARPRVERTITVFLVASSTVAIFTTVGI
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCHHHHHHHHHH
VLSLLFEALRFFHMVDFVDFLFGLNWSPQMSTRSDQVGSSGAFGMVPLLTGTMLISAISM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VVALPLGLFSAIYMSEYAQPRVRAIAKPALEILAGIPTVVFGFFAVVTVAPAIRAVGGAL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLNVAAESALAAGFVMGITLIPLISSLSDDVITAVPQSLREGAFGLGATRSETIVQVVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
AALPGIVGGVLLAVSRAIGETMIVVMAAGLSAKLTANPLEAVTTVTVQIVTLLVGDTEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SPKTLAAFALGLMLFGITLGLNVIALHIVQKYREKYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]