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The map label for this gene is rpfG [H]

Identifier: 83310310

GI number: 83310310

Start: 1283782

End: 1285068

Strand: Reverse

Name: rpfG [H]

Synonym: amb1211

Alternate gene names: 83310310

Gene position: 1285068-1283782 (Counterclockwise)

Preceding gene: 83310311

Following gene: 83310309

Centisome position: 25.87

GC content: 68.07

Gene sequence:

>1287_bases
ATGCCCGCCGAGGCCTCGCTGAACCGCCAGTTGGCCCTGCGCCTGGGCGTCGGCGGGCTGGCCATCGCCATCATCCTGGG
CGCCGCGACCTTTATCTACGAGATGCGGCGCATCGACGCCCCCTTCGTCGAGGAAGCGGTCGAGCAAGCCCGCACCCTGT
CGACGCAGCTTCCGCCGCGGCTGGATTCCACCACCCGGACCGAGGTCAAGGCCCGCCTTTCCGCCTTCCTGAAGGAACGG
CGCGGCGCCGCCGATCATTTCGCTGGGGCGGAGATCTATACCGCCGAGAAAACCGCCCTGGCCGAGGCCATGGCCGAGGA
CAACGGCATGCTCGCCCAGGCGGTCGACCGCTCCCGCCACGTTTTCCCCGAGCCGGGCGAGACCTGGTACACCAAGCACA
TCGTCGGCGGCGAGCTCTACCTGCTGGTGCTGACCGGCCTCACCGCGCCCGACAACAGCCGGCTGGGCTATTTCGAGGGT
GTCTACCATGTGTCGCGCATCCGCGTCGCCGGCGCCAGCCGGGCGGGACTGCGCACCTCGATCCTGGTGATCCTCTCGGT
CCTGGCCACCTCGGGCCTGCTGTTTCCGGTGATCAAGCGCCTGAACCGCTCGCTGGTGGAGCGCTCGCGCTCCCTGCTCC
ACGCCAATCTGGGCGCCATCGAGATGCTGGGCAACGCCATCGCCAAGCGCGACAGCGACACCAGCAGCCACAATTACCGC
GTCACCCTCTACGCCCTGCGCCTGGCCGAGGCTCTCCGCCTGGACGCGGCCCATATCCGTTCGCTGCTCAAGGGCGCCTT
CCTGCACGACGTGGGCAAGCTGGCCATTCCCGATGCCATCCTGCTCAAGCCGGGCAAGCTGGACGATGCCGAATTCGCCA
TCATGAAGACCCACATCACCCACGGCCTGGATCTGGTCCAGCGCTTCGCCTGGCTGAAGGATGCCGCCGCCGTGGTCGGC
CACCACCACGAGAAATATGACGGCAGCGGCTACATGGCCGGGCTGGCCGGCGATCAGATTCCGCTGGCCGCCCGCATCTT
CGCCATTGCCGACGTGTTCGACGCCCTGACCTCCAAGCGCCCCTACAAGGAGGCCTTCCCCGTCGCCCAGGCCACCGCCA
TCATGGCCGCCGGACGCGGCAGCCACTTCGACCCCGCCCTGCTCGGCCTGTTCTTTTCCATGGCCGGCGACCTGTACGGA
GAGTTCGGCGGCCGCGAGGACGACGGCCTGAAGCACACGCTGCGCGTCCGCACCCTGCACTATTTCGAGGAAGCGCTGGA
ACGGTGA

Upstream 100 bases:

>100_bases
CCGGGGCCGAGGCCCAGGACGCCGCCGCCGCGCCGGCTCCGCCCGACGTCACCACCATGAATGGCTTCCTGCCCGACCTG
GGCAAGAAGGCCTGAGTCCC

Downstream 100 bases:

>100_bases
CGATGATGCCCCCATGGAATCGGTTCCTGAGGCTTCTTTCCGAGGAACTGCGCCACTTCACCACCATCCATCCCAGCGAC
CGGTCCTGGCAGATGCCGCT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MPAEASLNRQLALRLGVGGLAIAIILGAATFIYEMRRIDAPFVEEAVEQARTLSTQLPPRLDSTTRTEVKARLSAFLKER
RGAADHFAGAEIYTAEKTALAEAMAEDNGMLAQAVDRSRHVFPEPGETWYTKHIVGGELYLLVLTGLTAPDNSRLGYFEG
VYHVSRIRVAGASRAGLRTSILVILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYR
VTLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHITHGLDLVQRFAWLKDAAAVVG
HHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKRPYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGDLYG
EFGGREDDGLKHTLRVRTLHYFEEALER

Sequences:

>Translated_428_residues
MPAEASLNRQLALRLGVGGLAIAIILGAATFIYEMRRIDAPFVEEAVEQARTLSTQLPPRLDSTTRTEVKARLSAFLKER
RGAADHFAGAEIYTAEKTALAEAMAEDNGMLAQAVDRSRHVFPEPGETWYTKHIVGGELYLLVLTGLTAPDNSRLGYFEG
VYHVSRIRVAGASRAGLRTSILVILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYR
VTLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHITHGLDLVQRFAWLKDAAAVVG
HHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKRPYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGDLYG
EFGGREDDGLKHTLRVRTLHYFEEALER
>Mature_427_residues
PAEASLNRQLALRLGVGGLAIAIILGAATFIYEMRRIDAPFVEEAVEQARTLSTQLPPRLDSTTRTEVKARLSAFLKERR
GAADHFAGAEIYTAEKTALAEAMAEDNGMLAQAVDRSRHVFPEPGETWYTKHIVGGELYLLVLTGLTAPDNSRLGYFEGV
YHVSRIRVAGASRAGLRTSILVILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYRV
TLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHITHGLDLVQRFAWLKDAAAVVGH
HHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKRPYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGDLYGE
FGGREDDGLKHTLRVRTLHYFEEALER

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 46720; Mature: 46589

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAEASLNRQLALRLGVGGLAIAIILGAATFIYEMRRIDAPFVEEAVEQARTLSTQLPPR
CCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
LDSTTRTEVKARLSAFLKERRGAADHFAGAEIYTAEKTALAEAMAEDNGMLAQAVDRSRH
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCC
VFPEPGETWYTKHIVGGELYLLVLTGLTAPDNSRLGYFEGVYHVSRIRVAGASRAGLRTS
CCCCCCCCEEEHEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHH
ILVILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEE
VTLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHIT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHH
HGLDLVQRFAWLKDAAAVVGHHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGDLYGEFGGREDDGLKHTLRVRTLH
CCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
YFEEALER
HHHHHHCC
>Mature Secondary Structure 
PAEASLNRQLALRLGVGGLAIAIILGAATFIYEMRRIDAPFVEEAVEQARTLSTQLPPR
CCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
LDSTTRTEVKARLSAFLKERRGAADHFAGAEIYTAEKTALAEAMAEDNGMLAQAVDRSRH
CCCCHHHHHHHHHHHHHHHHCCCCHHCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCC
VFPEPGETWYTKHIVGGELYLLVLTGLTAPDNSRLGYFEGVYHVSRIRVAGASRAGLRTS
CCCCCCCCEEEHEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHH
ILVILSVLATSGLLFPVIKRLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEE
VTLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHIT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHH
HGLDLVQRFAWLKDAAAVVGHHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGDLYGEFGGREDDGLKHTLRVRTLH
CCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
YFEEALER
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]