| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310309
Identifier: 83310309
GI number: 83310309
Start: 1282685
End: 1283779
Strand: Reverse
Name: 83310309
Synonym: amb1210
Alternate gene names: NA
Gene position: 1283779-1282685 (Counterclockwise)
Preceding gene: 83310310
Following gene: 83310307
Centisome position: 25.85
GC content: 65.11
Gene sequence:
>1095_bases ATGATGCCCCCATGGAATCGGTTCCTGAGGCTTCTTTCCGAGGAACTGCGCCACTTCACCACCATCCATCCCAGCGACCG GTCCTGGCAGATGCCGCTTGCCGCCGCCCTGGCATCGGGGCTGCCGCTCCTGGTGGGCTGCTCTTTCGATCGCCTCGATT ACGGCATGGTGTCGTCCCTGGGCGGCATGGTGTTCCTCTATCTGCCGCCGACGCCGCTGTACCACCGCATGGTGCTGCTG ATGGCCTCGGCCTTCGCCATGATCGCCTGTTACACCCTGGGGATGATGAGCCACCTCATCCCCGTGCTGATGATGCCGGT TCTGGTGTTCATCGCCATTCTGACCACCATGCTGTGTCGGTACTATCGCGTCGGCGTTCCCGGCAGCCTGTTCTTCATCA TGGCGGCCTCGATCGGCGCCTATTCCCCGGTCGAGCTGCTGCAGATCCCCCTGATGGTCGGCCTGCTGAGCATGGGCGCC CTGCTGGCCAGCCTGATCGCCTTTTTCTACAGCCTGGAGATGCTCCGCCTGCGCCCCGCCGCGCCGATCGAGCCCCTGCC GCCGGCCAGCTTCGACTTCGTCATCTTCGATTCCGTGGTCATCGGCGCCTTTGTCGGAGCCTCGCTGGCCCTGGCCCAGG TCCTGCACCTGGAAAAAGCCTATTGGGTGCCGGTCAGCTGCCTGGCGGTCATCCAGGGCACCTCGCTGCGGGCGGTCTGG AACCGCCAGATCCATCGCATCGTCGGGACCGGACTGGGCATGCTCCTGGCCTGGGGCCTCTTGTCGCTGCCGCTGAACAA CTGGGGCATCGCCGTCACCATGATGCTGCTGACCTTCGCCATCGAGACCGCGATCGTCCGCCACTACGCCTTCGCGGTGG TCCTGATCACCCCGCTGACCATCCTGCTGGCCGAAGCCGCCACCATGGGGCAGGGATCGGCGGCGGAACTGATCCAGTCG CGGTTCATCGATACCTGTCTGGGAAGCTTTGTCGGCCTTCTGGGAGGAATCTGCATCCACAGCCCCCGGTTCCGGGCCGT CACGGGGAAATATCTGCGCCGGCTGATCCCCACCCGGTTCCAGCCCCCGGCCTGA
Upstream 100 bases:
>100_bases ACCTGTACGGAGAGTTCGGCGGCCGCGAGGACGACGGCCTGAAGCACACGCTGCGCGTCCGCACCCTGCACTATTTCGAG GAAGCGCTGGAACGGTGACG
Downstream 100 bases:
>100_bases AACCGGAAGTATCACCGCCCCGATCTGCCTGCCGATTGGGCGGCGGATCGAGGCGGCGGCCCATCCCTCCCCAGGGATCT GCAACACGCCTCGATCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MMPPWNRFLRLLSEELRHFTTIHPSDRSWQMPLAAALASGLPLLVGCSFDRLDYGMVSSLGGMVFLYLPPTPLYHRMVLL MASAFAMIACYTLGMMSHLIPVLMMPVLVFIAILTTMLCRYYRVGVPGSLFFIMAASIGAYSPVELLQIPLMVGLLSMGA LLASLIAFFYSLEMLRLRPAAPIEPLPPASFDFVIFDSVVIGAFVGASLALAQVLHLEKAYWVPVSCLAVIQGTSLRAVW NRQIHRIVGTGLGMLLAWGLLSLPLNNWGIAVTMMLLTFAIETAIVRHYAFAVVLITPLTILLAEAATMGQGSAAELIQS RFIDTCLGSFVGLLGGICIHSPRFRAVTGKYLRRLIPTRFQPPA
Sequences:
>Translated_364_residues MMPPWNRFLRLLSEELRHFTTIHPSDRSWQMPLAAALASGLPLLVGCSFDRLDYGMVSSLGGMVFLYLPPTPLYHRMVLL MASAFAMIACYTLGMMSHLIPVLMMPVLVFIAILTTMLCRYYRVGVPGSLFFIMAASIGAYSPVELLQIPLMVGLLSMGA LLASLIAFFYSLEMLRLRPAAPIEPLPPASFDFVIFDSVVIGAFVGASLALAQVLHLEKAYWVPVSCLAVIQGTSLRAVW NRQIHRIVGTGLGMLLAWGLLSLPLNNWGIAVTMMLLTFAIETAIVRHYAFAVVLITPLTILLAEAATMGQGSAAELIQS RFIDTCLGSFVGLLGGICIHSPRFRAVTGKYLRRLIPTRFQPPA >Mature_364_residues MMPPWNRFLRLLSEELRHFTTIHPSDRSWQMPLAAALASGLPLLVGCSFDRLDYGMVSSLGGMVFLYLPPTPLYHRMVLL MASAFAMIACYTLGMMSHLIPVLMMPVLVFIAILTTMLCRYYRVGVPGSLFFIMAASIGAYSPVELLQIPLMVGLLSMGA LLASLIAFFYSLEMLRLRPAAPIEPLPPASFDFVIFDSVVIGAFVGASLALAQVLHLEKAYWVPVSCLAVIQGTSLRAVW NRQIHRIVGTGLGMLLAWGLLSLPLNNWGIAVTMMLLTFAIETAIVRHYAFAVVLITPLTILLAEAATMGQGSAAELIQS RFIDTCLGSFVGLLGGICIHSPRFRAVTGKYLRRLIPTRFQPPA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39863; Mature: 39863
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPPWNRFLRLLSEELRHFTTIHPSDRSWQMPLAAALASGLPLLVGCSFDRLDYGMVSSL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHC GGMVFLYLPPTPLYHRMVLLMASAFAMIACYTLGMMSHLIPVLMMPVLVFIAILTTMLCR CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYRVGVPGSLFFIMAASIGAYSPVELLQIPLMVGLLSMGALLASLIAFFYSLEMLRLRPA HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APIEPLPPASFDFVIFDSVVIGAFVGASLALAQVLHLEKAYWVPVSCLAVIQGTSLRAVW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH NRQIHRIVGTGLGMLLAWGLLSLPLNNWGIAVTMMLLTFAIETAIVRHYAFAVVLITPLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLAEAATMGQGSAAELIQSRFIDTCLGSFVGLLGGICIHSPRFRAVTGKYLRRLIPTRF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC QPPA CCCC >Mature Secondary Structure MMPPWNRFLRLLSEELRHFTTIHPSDRSWQMPLAAALASGLPLLVGCSFDRLDYGMVSSL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHC GGMVFLYLPPTPLYHRMVLLMASAFAMIACYTLGMMSHLIPVLMMPVLVFIAILTTMLCR CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYRVGVPGSLFFIMAASIGAYSPVELLQIPLMVGLLSMGALLASLIAFFYSLEMLRLRPA HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC APIEPLPPASFDFVIFDSVVIGAFVGASLALAQVLHLEKAYWVPVSCLAVIQGTSLRAVW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH NRQIHRIVGTGLGMLLAWGLLSLPLNNWGIAVTMMLLTFAIETAIVRHYAFAVVLITPLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLAEAATMGQGSAAELIQSRFIDTCLGSFVGLLGGICIHSPRFRAVTGKYLRRLIPTRF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC QPPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA