Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310311

Identifier: 83310311

GI number: 83310311

Start: 1285074

End: 1285703

Strand: Reverse

Name: 83310311

Synonym: amb1212

Alternate gene names: NA

Gene position: 1285703-1285074 (Counterclockwise)

Preceding gene: 83310313

Following gene: 83310310

Centisome position: 25.88

GC content: 60.16

Gene sequence:

>630_bases
ATGCAGGAGATTCAACGACATTGTCGGATACGCCTTTTTCTCCGACCGTGGCGGTTTCCTTTCATGAGCATGTCGACCGT
CCTCATCATCAGCCTTGCGGCGGGAGTGATCCTGGTCGTGGGCGGTGGCCTGCTCATGTACATGGCCCAGTTGGTGAAGA
ATGCCTATGAGTTGAAGATCCAGATCAATTCCGAGGTGGACGAACGCCTCACCAAGATGACCGAGGATCTCGACAAGAAA
AGCCGCTGGATCAAGCGTGATCTGATCGAGGAAATCGAGAAGATCAAGATCGCCATGGAAACCTCCAACGCCAACAAATT
CAACGAACTGACCGAACCTTTCATCAAGCGTCTCGAAACCATGGAAGAGACGCTGCGCAAGGACCGCGCCGACTGGACCA
AGGCGCTGAACGAGGACCGCGAGGTGATCCAGAAGGTGGATGCCAAGCTGGGGGCCCTGCGCCGCGAGATGAAGCAGCCG
GAAGCCAATCCCTCCCTCGATGCCGCCATGGCCAGCCTCGCCGCCGCCAAGGCCGCCGGGGCCGAGGCCCAGGACGCCGC
CGCCGCGCCGGCTCCGCCCGACGTCACCACCATGAATGGCTTCCTGCCCGACCTGGGCAAGAAGGCCTGA

Upstream 100 bases:

>100_bases
GCGACTCGTAACGGGACAACCGGTCTGACCACTTTGGCACCCCGCCCGAGCCCAAAGCAACATCAACGTCACCGTCCACA
ACCGGCGGCGGGCTTGCATC

Downstream 100 bases:

>100_bases
GTCCCATGCCCGCCGAGGCCTCGCTGAACCGCCAGTTGGCCCTGCGCCTGGGCGTCGGCGGGCTGGCCATCGCCATCATC
CTGGGCGCCGCGACCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK
SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP
EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA

Sequences:

>Translated_209_residues
MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK
SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP
EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA
>Mature_209_residues
MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK
SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP
EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23531; Mature: 23531

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKI
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEE
QINSEVDERLTKMTEDLDKKSRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLET
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQPEANPSLDAAMASLAAAKAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
AEAQDAAAAPAPPDVTTMNGFLPDLGKKA
CCCHHCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKI
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEE
QINSEVDERLTKMTEDLDKKSRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLET
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQPEANPSLDAAMASLAAAKAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
AEAQDAAAAPAPPDVTTMNGFLPDLGKKA
CCCHHCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA