| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310311
Identifier: 83310311
GI number: 83310311
Start: 1285074
End: 1285703
Strand: Reverse
Name: 83310311
Synonym: amb1212
Alternate gene names: NA
Gene position: 1285703-1285074 (Counterclockwise)
Preceding gene: 83310313
Following gene: 83310310
Centisome position: 25.88
GC content: 60.16
Gene sequence:
>630_bases ATGCAGGAGATTCAACGACATTGTCGGATACGCCTTTTTCTCCGACCGTGGCGGTTTCCTTTCATGAGCATGTCGACCGT CCTCATCATCAGCCTTGCGGCGGGAGTGATCCTGGTCGTGGGCGGTGGCCTGCTCATGTACATGGCCCAGTTGGTGAAGA ATGCCTATGAGTTGAAGATCCAGATCAATTCCGAGGTGGACGAACGCCTCACCAAGATGACCGAGGATCTCGACAAGAAA AGCCGCTGGATCAAGCGTGATCTGATCGAGGAAATCGAGAAGATCAAGATCGCCATGGAAACCTCCAACGCCAACAAATT CAACGAACTGACCGAACCTTTCATCAAGCGTCTCGAAACCATGGAAGAGACGCTGCGCAAGGACCGCGCCGACTGGACCA AGGCGCTGAACGAGGACCGCGAGGTGATCCAGAAGGTGGATGCCAAGCTGGGGGCCCTGCGCCGCGAGATGAAGCAGCCG GAAGCCAATCCCTCCCTCGATGCCGCCATGGCCAGCCTCGCCGCCGCCAAGGCCGCCGGGGCCGAGGCCCAGGACGCCGC CGCCGCGCCGGCTCCGCCCGACGTCACCACCATGAATGGCTTCCTGCCCGACCTGGGCAAGAAGGCCTGA
Upstream 100 bases:
>100_bases GCGACTCGTAACGGGACAACCGGTCTGACCACTTTGGCACCCCGCCCGAGCCCAAAGCAACATCAACGTCACCGTCCACA ACCGGCGGCGGGCTTGCATC
Downstream 100 bases:
>100_bases GTCCCATGCCCGCCGAGGCCTCGCTGAACCGCCAGTTGGCCCTGCGCCTGGGCGTCGGCGGGCTGGCCATCGCCATCATC CTGGGCGCCGCGACCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA
Sequences:
>Translated_209_residues MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA >Mature_209_residues MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKIQINSEVDERLTKMTEDLDKK SRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLETMEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQP EANPSLDAAMASLAAAKAAGAEAQDAAAAPAPPDVTTMNGFLPDLGKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23531; Mature: 23531
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEE QINSEVDERLTKMTEDLDKKSRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLET EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQPEANPSLDAAMASLAAAKAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC AEAQDAAAAPAPPDVTTMNGFLPDLGKKA CCCHHCCCCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MQEIQRHCRIRLFLRPWRFPFMSMSTVLIISLAAGVILVVGGGLLMYMAQLVKNAYELKI CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEE QINSEVDERLTKMTEDLDKKSRWIKRDLIEEIEKIKIAMETSNANKFNELTEPFIKRLET EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MEETLRKDRADWTKALNEDREVIQKVDAKLGALRREMKQPEANPSLDAAMASLAAAKAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC AEAQDAAAAPAPPDVTTMNGFLPDLGKKA CCCHHCCCCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA