| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is fieF [H]
Identifier: 83309984
GI number: 83309984
Start: 945069
End: 945971
Strand: Reverse
Name: fieF [H]
Synonym: amb0885
Alternate gene names: 83309984
Gene position: 945971-945069 (Counterclockwise)
Preceding gene: 83309985
Following gene: 83309981
Centisome position: 19.04
GC content: 67.88
Gene sequence:
>903_bases ATGAGCCATCCAGCCGACCATGGCCGCCTGATGCGGCTGGCGACCTACGCCTCGACCGGCACCGCCGCCTTGCTGATCGC CGTCAAGCTGGGCGCCTGGCTCGCCACCGGCTCGGTGGCGCTGCTGTCCACCCTGATCGATTCCACCCTGGATCTGGCCG CTTCGGCGCTCAATCTGATGGCGGTGCGCCATGCCCTGGTGCCGGCCGATGACGAGCATCGCTTCGGCCACGGCAAGGCA GAGGCCCTGGCTGGGCTGGGGCAGGCCGCCTTCGTGGTGGGCTCGGGCGGTTTTCTGCTGGCCGAGGCCGGCAGCCGCAT GGTCCACCCCCAGCCGGTCAGCCACGGCGAATGGGGTATCGCGGTGATGGTGTTCTCCATCGCCGCCACCTTCGCCCTGG TGGGATTCCAGCGCATGGTGGCCAAGCGCACCGGCTCACTGGCCATCTCGGCCGATTCCCTGCACTACACCGGCGATCTG TTGATCAATGCCAGCGTCATCGTCTCGCTGCTGCTGGCGGCGGGCACCGGCTGGCCCCTGGCCGATCCGCTGTTCGCCAT CGGCATCGCCGGCTGGCTGATGATCAACGCCTGGCAGATCTTCCGGCTGTCGCTGGACACCTTGATGGACAAGGAACTAC CCGAAGCCGACCGCGAGCGCATCCGCGCCATCGTCGCCGCCCATCCCGGCGTTCAGGACCACCACGACCTGCGCACCCGC ACTTCGGGCCGCCAGGGCTTCATCCAGTTCCATCTGGAATTGCCCGGCAACCTGCCGCTGGTCGAGGCGCACCGCATCTC CGACGATGTGGAGAAGGCCCTCCTGGCGGAATTCCCCGGCTTCGACGTGATCATCCACGAGGACCCGGCGGGCATCCGCG ATGCGCGGACGGAGTTTCGTTAA
Upstream 100 bases:
>100_bases CCAGACGCATCGAATTCTGGCACGACCGGCCGTTCCGCCTGCACGACCGCTTCGACTATGTCCGCGACGGGGACGGCTGG CATCTGGAGCACCTCTACCC
Downstream 100 bases:
>100_bases GGGCTTGTTTCAGGCGTGGCCGGCGCTGGCCGACAGCAGGCCCACGTCGATGCCCAGCTTGTGGATGGCGCGCTCGTATT TGTGTTCGAGATCCCGGCTG
Product: Co/Zn/Cd cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSHPADHGRLMRLATYASTGTAALLIAVKLGAWLATGSVALLSTLIDSTLDLAASALNLMAVRHALVPADDEHRFGHGKA EALAGLGQAAFVVGSGGFLLAEAGSRMVHPQPVSHGEWGIAVMVFSIAATFALVGFQRMVAKRTGSLAISADSLHYTGDL LINASVIVSLLLAAGTGWPLADPLFAIGIAGWLMINAWQIFRLSLDTLMDKELPEADRERIRAIVAAHPGVQDHHDLRTR TSGRQGFIQFHLELPGNLPLVEAHRISDDVEKALLAEFPGFDVIIHEDPAGIRDARTEFR
Sequences:
>Translated_300_residues MSHPADHGRLMRLATYASTGTAALLIAVKLGAWLATGSVALLSTLIDSTLDLAASALNLMAVRHALVPADDEHRFGHGKA EALAGLGQAAFVVGSGGFLLAEAGSRMVHPQPVSHGEWGIAVMVFSIAATFALVGFQRMVAKRTGSLAISADSLHYTGDL LINASVIVSLLLAAGTGWPLADPLFAIGIAGWLMINAWQIFRLSLDTLMDKELPEADRERIRAIVAAHPGVQDHHDLRTR TSGRQGFIQFHLELPGNLPLVEAHRISDDVEKALLAEFPGFDVIIHEDPAGIRDARTEFR >Mature_299_residues SHPADHGRLMRLATYASTGTAALLIAVKLGAWLATGSVALLSTLIDSTLDLAASALNLMAVRHALVPADDEHRFGHGKAE ALAGLGQAAFVVGSGGFLLAEAGSRMVHPQPVSHGEWGIAVMVFSIAATFALVGFQRMVAKRTGSLAISADSLHYTGDLL INASVIVSLLLAAGTGWPLADPLFAIGIAGWLMINAWQIFRLSLDTLMDKELPEADRERIRAIVAAHPGVQDHHDLRTRT SGRQGFIQFHLELPGNLPLVEAHRISDDVEKALLAEFPGFDVIIHEDPAGIRDARTEFR
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=286, Percent_Identity=45.1048951048951, Blast_Score=249, Evalue=1e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32048; Mature: 31917
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPADHGRLMRLATYASTGTAALLIAVKLGAWLATGSVALLSTLIDSTLDLAASALNLM CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AVRHALVPADDEHRFGHGKAEALAGLGQAAFVVGSGGFLLAEAGSRMVHPQPVSHGEWGI HHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHH AVMVFSIAATFALVGFQRMVAKRTGSLAISADSLHYTGDLLINASVIVSLLLAAGTGWPL HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHEECHHHHHHHHHHCCCCCCC ADPLFAIGIAGWLMINAWQIFRLSLDTLMDKELPEADRERIRAIVAAHPGVQDHHDLRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH TSGRQGFIQFHLELPGNLPLVEAHRISDDVEKALLAEFPGFDVIIHEDPAGIRDARTEFR CCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCC >Mature Secondary Structure SHPADHGRLMRLATYASTGTAALLIAVKLGAWLATGSVALLSTLIDSTLDLAASALNLM CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AVRHALVPADDEHRFGHGKAEALAGLGQAAFVVGSGGFLLAEAGSRMVHPQPVSHGEWGI HHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHH AVMVFSIAATFALVGFQRMVAKRTGSLAISADSLHYTGDLLINASVIVSLLLAAGTGWPL HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCHHEECHHHHHHHHHHCCCCCCC ADPLFAIGIAGWLMINAWQIFRLSLDTLMDKELPEADRERIRAIVAAHPGVQDHHDLRTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH TSGRQGFIQFHLELPGNLPLVEAHRISDDVEKALLAEFPGFDVIIHEDPAGIRDARTEFR CCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA