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The map label for this gene is nirB [H]

Identifier: 83309981

GI number: 83309981

Start: 942706

End: 943626

Strand: Reverse

Name: nirB [H]

Synonym: amb0882

Alternate gene names: 83309981

Gene position: 943626-942706 (Counterclockwise)

Preceding gene: 83309984

Following gene: 83309979

Centisome position: 19.0

GC content: 69.06

Gene sequence:

>921_bases
ATGAAACGCACCGCGCTCACCGCCCTGATGGTTTTCGCCGCCACCCCCGCCCTCGCCCTGGACTGGGGCAGCGTGCCGGG
CAAGGAGATCGTCCTGTTCTACCCCGGCCAGTCGTCGCTGGAATGGGTGCTGTCGGGCGAGCACGGCGGGGCGCCCAAGG
TCAAGAACGGCAAGGCCTGCAAGGAGTGCCATCTGGGCGAGGAAAAGGACATGGGCGCCACTCTGGTGTCGGGCTCCAAG
AATGAACCCGCGCCCATTCCGGCCAAGCCCGCCTTCATCCCCGCCACGGTCAAGGTGGCCCAGGAGGGCGGCAAGCTCCT
CGTCCGCCTGGACTTCAAGGAGGGCGCCCAGCCCGATTCCAAGATGGATGCCGACTTCGCCACCAAGGTGACCATGATGC
TCGACGACGGCAAGCTGCCCGAAGCGGCGCAGGCCGGCTGCTGGGGCACCTGCCACGAGGACGCGGCCAAGATGCCGGCC
GGGGGCGCCGGCGAGCGCACCAAATACCTGAACCGCACCCGCGCCAAGCCGGGCCGACAGGGCGCCGGCGACGAACTGGT
GGCGGCGGCGGAACTGGAGAAGATGCAGGCCTCCGGTCAGGTGATGGAATACTGGCAGGCCCGCCTGAAGCCCGGCGCGG
CGGCAGTGGCGGCCGGCGGCTTCATTTTCGACAAGCGCGCCGAGGCCAAGCCCTCGCCCGTGACCGCCGAGGCCACCCAG
AGCGGCGACGGCTGGAGCGTGACGCTCAGCCGCCCGCTGGCCGCCTCCGCCCCGTTCAAGACCATCGAGGTGGGCAAGAC
CTACAATCTGGGTTTCGCCATCCATGCCGGGCACACCGCCCGGCGCTTCCACTATGTCTCGCTGGAGCACACCCTGGTGC
TGGACAAGGGCGACGCCGACCTGGTCGCCGTGAAGAAGTAA

Upstream 100 bases:

>100_bases
GACTGGTTACGTGGACATCCCCGGCTCTGCATTGAGCAAGGTCAAGTCACCGGCCTCCGCCCTGTGGTTAGGTCGCCTTC
CCGCAACCAGGAAGCCCGCC

Downstream 100 bases:

>100_bases
TCTTGGACCGAAGACCGGGAGGCTCAGCCCTCCCGGTTGATGGCCTTGACCAGATCGCCGATGGAAACCAGACCCCGCGG
CTCGCCGTCCTGGACCACCG

Product: cytochrome c-552 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKRTALTALMVFAATPALALDWGSVPGKEIVLFYPGQSSLEWVLSGEHGGAPKVKNGKACKECHLGEEKDMGATLVSGSK
NEPAPIPAKPAFIPATVKVAQEGGKLLVRLDFKEGAQPDSKMDADFATKVTMMLDDGKLPEAAQAGCWGTCHEDAAKMPA
GGAGERTKYLNRTRAKPGRQGAGDELVAAAELEKMQASGQVMEYWQARLKPGAAAVAAGGFIFDKRAEAKPSPVTAEATQ
SGDGWSVTLSRPLAASAPFKTIEVGKTYNLGFAIHAGHTARRFHYVSLEHTLVLDKGDADLVAVKK

Sequences:

>Translated_306_residues
MKRTALTALMVFAATPALALDWGSVPGKEIVLFYPGQSSLEWVLSGEHGGAPKVKNGKACKECHLGEEKDMGATLVSGSK
NEPAPIPAKPAFIPATVKVAQEGGKLLVRLDFKEGAQPDSKMDADFATKVTMMLDDGKLPEAAQAGCWGTCHEDAAKMPA
GGAGERTKYLNRTRAKPGRQGAGDELVAAAELEKMQASGQVMEYWQARLKPGAAAVAAGGFIFDKRAEAKPSPVTAEATQ
SGDGWSVTLSRPLAASAPFKTIEVGKTYNLGFAIHAGHTARRFHYVSLEHTLVLDKGDADLVAVKK
>Mature_306_residues
MKRTALTALMVFAATPALALDWGSVPGKEIVLFYPGQSSLEWVLSGEHGGAPKVKNGKACKECHLGEEKDMGATLVSGSK
NEPAPIPAKPAFIPATVKVAQEGGKLLVRLDFKEGAQPDSKMDADFATKVTMMLDDGKLPEAAQAGCWGTCHEDAAKMPA
GGAGERTKYLNRTRAKPGRQGAGDELVAAAELEKMQASGQVMEYWQARLKPGAAAVAAGGFIFDKRAEAKPSPVTAEATQ
SGDGWSVTLSRPLAASAPFKTIEVGKTYNLGFAIHAGHTARRFHYVSLEHTLVLDKGDADLVAVKK

Specific function: May play a role in nitrite reduction. Shows peroxidase activity on proteolytic modification [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019020
- InterPro:   IPR009056 [H]

Pfam domain/function: PF09459 EB_dh [H]

EC number: NA

Molecular weight: Translated: 32301; Mature: 32301

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTALTALMVFAATPALALDWGSVPGKEIVLFYPGQSSLEWVLSGEHGGAPKVKNGKAC
CCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCH
KECHLGEEKDMGATLVSGSKNEPAPIPAKPAFIPATVKVAQEGGKLLVRLDFKEGAQPDS
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
KMDADFATKVTMMLDDGKLPEAAQAGCWGTCHEDAAKMPAGGAGERTKYLNRTRAKPGRQ
CCCCCHHEEEEEEEECCCCCHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GAGDELVAAAELEKMQASGQVMEYWQARLKPGAAAVAAGGFIFDKRAEAKPSPVTAEATQ
CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCCCEEECCC
SGDGWSVTLSRPLAASAPFKTIEVGKTYNLGFAIHAGHTARRFHYVSLEHTLVLDKGDAD
CCCCEEEEECCCCCCCCCCEEEECCCEECCEEEEECCCCEEEEEEEEEEEEEEEECCCCC
LVAVKK
EEEEEC
>Mature Secondary Structure
MKRTALTALMVFAATPALALDWGSVPGKEIVLFYPGQSSLEWVLSGEHGGAPKVKNGKAC
CCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCH
KECHLGEEKDMGATLVSGSKNEPAPIPAKPAFIPATVKVAQEGGKLLVRLDFKEGAQPDS
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCC
KMDADFATKVTMMLDDGKLPEAAQAGCWGTCHEDAAKMPAGGAGERTKYLNRTRAKPGRQ
CCCCCHHEEEEEEEECCCCCHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GAGDELVAAAELEKMQASGQVMEYWQARLKPGAAAVAAGGFIFDKRAEAKPSPVTAEATQ
CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCCCCEEECCC
SGDGWSVTLSRPLAASAPFKTIEVGKTYNLGFAIHAGHTARRFHYVSLEHTLVLDKGDAD
CCCCEEEEECCCCCCCCCCEEEECCCEECCEEEEECCCCEEEEEEEEEEEEEEEECCCCC
LVAVKK
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2001732; 2539041 [H]