| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309975
Identifier: 83309975
GI number: 83309975
Start: 935396
End: 935791
Strand: Reverse
Name: 83309975
Synonym: amb0876
Alternate gene names: NA
Gene position: 935791-935396 (Counterclockwise)
Preceding gene: 83309979
Following gene: 83309974
Centisome position: 18.84
GC content: 68.43
Gene sequence:
>396_bases ATGGCCAAGCCCGAGGTATTCCGCATCAGCCTGGACGACGCCGCCGCCGATTCCACCTTCCGGCGCTTTACCGCCGCCAT ATGCGGCGAGACCGGGCATGGCCGCCACGCGGTGCTGGTCCAGTCGGCCGAGGGGCCGCGGCTTCTGCTGCAGAACAGCG GGCGCTGCCTGGATGCGGATACGCCGTGGCGCATGACCCGCGAGGTGCTAGCCCCGGTCTTCCTGTTCGACGACCAGGTG GAATGGGTGGCGCTGTTTCCCATGGACGACTGGCAGATGCGTTGCGACGCGGCGCTGGAGGCCTCGTTCACCGCCGACAA GCCATGGTCCCGCCTGCTGGCCGAGGAATTGCTGGCCGAACTGCCTGGGGTCCCCCACCTGATCGTCTCGCGCTGA
Upstream 100 bases:
>100_bases TAGGCCCGGAGGCCCGGGAGCAAGGAAAGCCCCCTTGACGGGCATCAAGGGGGCTTTCCCTTCCGCCATGCTCTGATGGC CCCTTGAAGGAGCACACCCC
Downstream 100 bases:
>100_bases GCCGCCAAGCTTGACGGGGCGGCCCCACCCGTCTACTCAATCTCCCAAATCGACCACGCCCAAGCGGAGAGCCCCCATGG CCTCGTACCAGTACGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAKPEVFRISLDDAAADSTFRRFTAAICGETGHGRHAVLVQSAEGPRLLLQNSGRCLDADTPWRMTREVLAPVFLFDDQV EWVALFPMDDWQMRCDAALEASFTADKPWSRLLAEELLAELPGVPHLIVSR
Sequences:
>Translated_131_residues MAKPEVFRISLDDAAADSTFRRFTAAICGETGHGRHAVLVQSAEGPRLLLQNSGRCLDADTPWRMTREVLAPVFLFDDQV EWVALFPMDDWQMRCDAALEASFTADKPWSRLLAEELLAELPGVPHLIVSR >Mature_130_residues AKPEVFRISLDDAAADSTFRRFTAAICGETGHGRHAVLVQSAEGPRLLLQNSGRCLDADTPWRMTREVLAPVFLFDDQVE WVALFPMDDWQMRCDAALEASFTADKPWSRLLAEELLAELPGVPHLIVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14654; Mature: 14523
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPEVFRISLDDAAADSTFRRFTAAICGETGHGRHAVLVQSAEGPRLLLQNSGRCLDAD CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCEECCC TPWRMTREVLAPVFLFDDQVEWVALFPMDDWQMRCDAALEASFTADKPWSRLLAEELLAE CCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHHH LPGVPHLIVSR CCCCCEEEECC >Mature Secondary Structure AKPEVFRISLDDAAADSTFRRFTAAICGETGHGRHAVLVQSAEGPRLLLQNSGRCLDAD CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCEECCC TPWRMTREVLAPVFLFDDQVEWVALFPMDDWQMRCDAALEASFTADKPWSRLLAEELLAE CCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHCHHHCCCCCCCCCHHHHHHHHHHHH LPGVPHLIVSR CCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA