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The map label for this gene is yjjK [C]

Identifier: 83309974

GI number: 83309974

Start: 933640

End: 935319

Strand: Reverse

Name: yjjK [C]

Synonym: amb0875

Alternate gene names: 83309974

Gene position: 935319-933640 (Counterclockwise)

Preceding gene: 83309975

Following gene: 83309973

Centisome position: 18.83

GC content: 65.18

Gene sequence:

>1680_bases
ATGGCCTCGTACCAGTACGTCTATGTCATGAAGAACCTGACCAAGGCCTATCCCGGCGGGAAGGAAATCATGAAGGGGCT
GACCCTCAGCTTCCTGCCCGGCGCCAAGATCGGCGTGCTGGGCGTCAACGGCGCGGGCAAGTCGACCCTGTTGAAGATCA
TGGCCGGCATCGACAAGGAATACGGCGGCGAAGCCTGGGCGGCCGAGGGCGTCAAGATCGGCTATCTGGCGCAGGAACCC
CATCTGGACCCCGCCAAGGACGTCATGGGCAACGTCATGGAGGCGGTGGCCGAGACCAAGGCCCTGCTGGACCGTTTCGA
GGAAGTCTCGGCCAAGTTCGCCGAGGAGCTTTCCGACGACGAGATGAACGACCTGATCGCCGAACAGGGCGAGTTGCAGG
AAAAGATCGACCATCTCAATGCCTGGGACCTGACGCGGACCATCGAGATCGCCATGGACGCGCTGCGCTGCCCGCCGGGC
GATGCCGACGTCACCACCCTGTCGGGCGGTGAGCGCCGCCGCATCGCCCTGTGCCGCCTGCTGCTGTCGCACCCCGACAT
GCTGCTGCTGGACGAGCCCACCAACCATCTGGACGCCGAATCGGTGGCCTGGCTGGAGCGCTTCCTGGAGGATTACTCCG
GCACGGTGGTGATGATCACCCACGACCGCTACTTCCTGGACAACGTCACCGGCTGGATTCTGGAACTGGAGCGCGGCCAC
GGCATCCCCTACGAGGGCAACTACACCTCGTGGCTGGAGCAGAAGGGCAAGCGCCTGGAGCAGGAAGAGCGGGAAGAGAC
CGCCCGCATGCGCGCCATCCGCGACGAGTTGGAATGGGTGCGGTCCAGCCCCAAGGCTCGCCAGACCAAGAGCAAGGCCC
GTATCAGCGCCTTCGAGGATCTGGTGGCCAAGTCCCAGGAAAAGGCCACCGGCCCCGCCGTCATCTCCATCCCCCCCGGC
CCGCGCCTGGGCGGCAAGGTGATCGAGGCCGAGAACGTCTCCAAGGCGTTCGGCGACAACCTGCTGTACGAGAACCTGAA
CTTCCGCCTGCCCCCGGGCGGCATCGTCGGCATCATCGGCCCCAACGGCGCCGGCAAGACCACCCTGTTCCGCATGATCA
CCGGCCAGGAGCAACCCACCACCGGCAGCTTCACCGTGGGCGAGACCGTGGTGCTGGGCTATGTGGACCAGAGCCGCGAT
TCGCTGGATCCCGACAAGACCGCCTTCGAGGAAATCTCCGACGGCCAGGAGGAAATCGATCTCGGCAAGCGCAAGATCAA
CGCCCGCGCCTATGCCGGCCTGTTCAACTTCAAGGGCGCCGACCAGCAGAAGAAGGTGGGCGTGCTGTCGGGCGGCGAGC
GCAACCGCGTCCATCTGGCCAAGATGCTGAGCCGTCCCGCCAACGTCATCCTCCTGGACGAACCCACCAACGATTTGGAC
GTGGAGACCCTGTCGGCGCTGGAAGACGCCCTGGCGGAATTCCCCGGCTGCGCCGTGGTCATCAGCCACGATCGCTTCTT
CCTGGACCGCATCGCCACCCACATCCTGGCCTTCGAGGGCGATTCCCAGGTGGTGTGGTTCGAGGGCAACTACCAGGATT
ACGAGGCGGACCGTCACCGCCGCCTGGGGACCGACGCCGACCAGCCGCACCGCATCAAGTACAAGCCGCTGAAGCGTTAG

Upstream 100 bases:

>100_bases
CCCCACCTGATCGTCTCGCGCTGAGCCGCCAAGCTTGACGGGGCGGCCCCACCCGTCTACTCAATCTCCCAAATCGACCA
CGCCCAAGCGGAGAGCCCCC

Downstream 100 bases:

>100_bases
GACGCGCCCCATGTCAAAGCATACGGTCATCGCCGCCGCCTGCGCCCTGTTGCTGGCGGCGGGGACCGGCGCCTGGTTCC
TGGCGGGCCGCACCCCGGCC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MASYQYVYVMKNLTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQEP
HLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDDEMNDLIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPG
DADVTTLSGGERRRIALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGH
GIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQEKATGPAVISIPPG
PRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGQEQPTTGSFTVGETVVLGYVDQSRD
SLDPDKTAFEEISDGQEEIDLGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLD
VETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHRIKYKPLKR

Sequences:

>Translated_559_residues
MASYQYVYVMKNLTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQEP
HLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDDEMNDLIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPG
DADVTTLSGGERRRIALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGH
GIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQEKATGPAVISIPPG
PRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGQEQPTTGSFTVGETVVLGYVDQSRD
SLDPDKTAFEEISDGQEEIDLGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLD
VETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHRIKYKPLKR
>Mature_558_residues
ASYQYVYVMKNLTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQEPH
LDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDDEMNDLIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPGD
ADVTTLSGGERRRIALCRLLLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGHG
IPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQEKATGPAVISIPPGP
RLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGQEQPTTGSFTVGETVVLGYVDQSRDS
LDPDKTAFEEISDGQEEIDLGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLDV
ETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHRIKYKPLKR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=525, Percent_Identity=31.4285714285714, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI27881506, Length=525, Percent_Identity=31.4285714285714, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=27.3069679849341, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI10947135, Length=553, Percent_Identity=27.4864376130199, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI69354671, Length=553, Percent_Identity=27.4864376130199, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI9665248, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=59.6396396396396, Blast_Score=668, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=35.9840954274354, Blast_Score=311, Evalue=1e-85,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=31.4393939393939, Blast_Score=244, Evalue=7e-66,
Organism=Escherichia coli, GI1787041, Length=542, Percent_Identity=29.8892988929889, Blast_Score=231, Evalue=9e-62,
Organism=Escherichia coli, GI87081782, Length=531, Percent_Identity=25.4237288135593, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=31.0880829015544, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788225, Length=210, Percent_Identity=32.3809523809524, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48994943, Length=483, Percent_Identity=24.6376811594203, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788165, Length=219, Percent_Identity=31.5068493150685, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=163, Percent_Identity=33.7423312883436, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=29.0748898678414, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=31.0344827586207, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789593, Length=226, Percent_Identity=31.858407079646, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787164, Length=224, Percent_Identity=29.4642857142857, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081791, Length=199, Percent_Identity=28.1407035175879, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787712, Length=191, Percent_Identity=27.2251308900524, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786803, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=27.6497695852535, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1790739, Length=175, Percent_Identity=28, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=28.0542986425339, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1790525, Length=238, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=24.5192307692308, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=27.1889400921659, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1788053, Length=167, Percent_Identity=30.5389221556886, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1789864, Length=199, Percent_Identity=25.1256281407035, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=26.5454545454545, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=552, Percent_Identity=28.6231884057971, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI17555318, Length=560, Percent_Identity=27.8571428571429, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17558664, Length=241, Percent_Identity=26.9709543568465, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=217, Percent_Identity=27.6497695852535, Blast_Score=69, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=272, Percent_Identity=25.3676470588235, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=31.1284046692607, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=28.1535648994516, Blast_Score=187, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6323278, Length=441, Percent_Identity=26.530612244898, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=397, Percent_Identity=27.7078085642317, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=296, Percent_Identity=27.7027027027027, Blast_Score=101, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6320266, Length=393, Percent_Identity=22.64631043257, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666836, Length=550, Percent_Identity=29.6363636363636, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24642252, Length=538, Percent_Identity=30.4832713754647, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI18859989, Length=538, Percent_Identity=30.4832713754647, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24641342, Length=550, Percent_Identity=27.8181818181818, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24666092, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007184, Length=172, Percent_Identity=31.9767441860465, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=172, Percent_Identity=31.9767441860465, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62056; Mature: 61925

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYQYVYVMKNLTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKE
CCCCEEEHHHHHHHHHCCCHHHHHHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCHH
YGGEAWAAEGVKIGYLAQEPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDD
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EMNDLIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPGDADVTTLSGGERRRIALCRL
HHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH
LLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGH
HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEEECCC
GIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFED
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LVAKSQEKATGPAVISIPPGPRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIG
HHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHCCCCEECCCCEECCCCCEEEEEC
PNGAGKTTLFRMITGQEQPTTGSFTVGETVVLGYVDQSRDSLDPDKTAFEEISDGQEEID
CCCCCCHHEEEEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHH
LGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLD
HHHHHHCHHHHEEECCCCCCCCHHCCCEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
VETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHR
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHH
RLGTDADQPHRIKYKPLKR
HCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
ASYQYVYVMKNLTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKE
CCCEEEHHHHHHHHHCCCHHHHHHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCHH
YGGEAWAAEGVKIGYLAQEPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDD
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EMNDLIAEQGELQEKIDHLNAWDLTRTIEIAMDALRCPPGDADVTTLSGGERRRIALCRL
HHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH
LLSHPDMLLLDEPTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGH
HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEEECCC
GIPYEGNYTSWLEQKGKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFED
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LVAKSQEKATGPAVISIPPGPRLGGKVIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIG
HHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHCCCCEECCCCEECCCCCEEEEEC
PNGAGKTTLFRMITGQEQPTTGSFTVGETVVLGYVDQSRDSLDPDKTAFEEISDGQEEID
CCCCCCHHEEEEECCCCCCCCCCEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHHHH
LGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLD
HHHHHHCHHHHEEECCCCCCCCHHCCCEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
VETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHR
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEEECCCCCCHHHHHH
RLGTDADQPHRIKYKPLKR
HCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]