| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309973
Identifier: 83309973
GI number: 83309973
Start: 932664
End: 933629
Strand: Reverse
Name: 83309973
Synonym: amb0874
Alternate gene names: NA
Gene position: 933629-932664 (Counterclockwise)
Preceding gene: 83309974
Following gene: 83309972
Centisome position: 18.8
GC content: 68.94
Gene sequence:
>966_bases ATGTCAAAGCATACGGTCATCGCCGCCGCCTGCGCCCTGTTGCTGGCGGCGGGGACCGGCGCCTGGTTCCTGGCGGGCCG CACCCCGGCCTCCGGCGGCGACGAGCTGGCGGCGGTGCCGGGCGACGGCCTGGTCACCTTCGCCCGCATCCAGACCGAGA TGAACCGCGCCGGGGCCGGGCGCCCCGCCCTGCCCGCCGACGCCAATGCCGACAAGCTGGAAGCCATCGGCGGCGCGCTC AGGGAGTTCCTGGCCGGCAACACGGTCAAGGCCTCCAACATGCTCGACGACATCGATGCCGAGATCGACCTTCGGGTCCC CACCGACGAGCAGGTGGCCGCCGACCCGCTGCTGGCCGACAAGGAGGAATGGCTGGTCAGCTATTTCGAATTGCTGCCCG ACGCCCCCCAGGGCAAGGGCGTCAAGGCCGACACCTATGTCTTCATCCGCTATGCCCTGACGCTCCGCAAGGTCGAGGCC ATCCTGCTGGCCGAGACCATGCCGTCCACCAAGGGCTATGATCTGGTGGCCCGCAAGTCCGAACCCGAACCCTCGGTGTT TGACGGCATGAACCTGCGCTTTCCCTGCCGGATCGTCACCAACCACCGCGCCCTGCTGGAAGAGGCCGCCAAGCGCATGG GACCTCTCATGGGCGGGCCGCTGACCGATTGCCCCACGCCCAAGGGCCGCGAATCCGACTTCAACCTGCTGGAGCGTATC GCCCGCGATCCGGCCGGCGCCCTGACCTCGGTCAGCAATGGCCACGGCCATTTGCCGCGCGATCTCAAGACACCGCTGAT GACCGCCGCCGCCAAGGGCCGTTTGGCCGACGTGGAAAAGGCCATGAAGGCCGGGGCCGACCCCCACCGGGCCGATGCCC GCGGCCGCACGGCGCTCCACTACCTTTTGGGCAATCAGACCCTGCCGGCCGACGAGCGGGCCCAGGCGATCAAGCTCCTA TACTGA
Upstream 100 bases:
>100_bases TACCAGGATTACGAGGCGGACCGTCACCGCCGCCTGGGGACCGACGCCGACCAGCCGCACCGCATCAAGTACAAGCCGCT GAAGCGTTAGGACGCGCCCC
Downstream 100 bases:
>100_bases TGCCCCCCTCCCTTGAAGGGACTTCCCCCTGCCCCAATCTGTGAGGGGGAGAGCCTGAAGATCCCATAGCGAGGGAGGGT GCGCATGATCGTCAAGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSKHTVIAAACALLLAAGTGAWFLAGRTPASGGDELAAVPGDGLVTFARIQTEMNRAGAGRPALPADANADKLEAIGGAL REFLAGNTVKASNMLDDIDAEIDLRVPTDEQVAADPLLADKEEWLVSYFELLPDAPQGKGVKADTYVFIRYALTLRKVEA ILLAETMPSTKGYDLVARKSEPEPSVFDGMNLRFPCRIVTNHRALLEEAAKRMGPLMGGPLTDCPTPKGRESDFNLLERI ARDPAGALTSVSNGHGHLPRDLKTPLMTAAAKGRLADVEKAMKAGADPHRADARGRTALHYLLGNQTLPADERAQAIKLL Y
Sequences:
>Translated_321_residues MSKHTVIAAACALLLAAGTGAWFLAGRTPASGGDELAAVPGDGLVTFARIQTEMNRAGAGRPALPADANADKLEAIGGAL REFLAGNTVKASNMLDDIDAEIDLRVPTDEQVAADPLLADKEEWLVSYFELLPDAPQGKGVKADTYVFIRYALTLRKVEA ILLAETMPSTKGYDLVARKSEPEPSVFDGMNLRFPCRIVTNHRALLEEAAKRMGPLMGGPLTDCPTPKGRESDFNLLERI ARDPAGALTSVSNGHGHLPRDLKTPLMTAAAKGRLADVEKAMKAGADPHRADARGRTALHYLLGNQTLPADERAQAIKLL Y >Mature_320_residues SKHTVIAAACALLLAAGTGAWFLAGRTPASGGDELAAVPGDGLVTFARIQTEMNRAGAGRPALPADANADKLEAIGGALR EFLAGNTVKASNMLDDIDAEIDLRVPTDEQVAADPLLADKEEWLVSYFELLPDAPQGKGVKADTYVFIRYALTLRKVEAI LLAETMPSTKGYDLVARKSEPEPSVFDGMNLRFPCRIVTNHRALLEEAAKRMGPLMGGPLTDCPTPKGRESDFNLLERIA RDPAGALTSVSNGHGHLPRDLKTPLMTAAAKGRLADVEKAMKAGADPHRADARGRTALHYLLGNQTLPADERAQAIKLLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34257; Mature: 34125
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHTVIAAACALLLAAGTGAWFLAGRTPASGGDELAAVPGDGLVTFARIQTEMNRAGAG CCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHHHCCCC RPALPADANADKLEAIGGALREFLAGNTVKASNMLDDIDAEIDLRVPTDEQVAADPLLAD CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCEEEEECCCCCHHHCCCCCCC KEEWLVSYFELLPDAPQGKGVKADTYVFIRYALTLRKVEAILLAETMPSTKGYDLVARKS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC EPEPSVFDGMNLRFPCRIVTNHRALLEEAAKRMGPLMGGPLTDCPTPKGRESDFNLLERI CCCCCHHCCCCCEECEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH ARDPAGALTSVSNGHGHLPRDLKTPLMTAAAKGRLADVEKAMKAGADPHRADARGRTALH HCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEH YLLGNQTLPADERAQAIKLLY HHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SKHTVIAAACALLLAAGTGAWFLAGRTPASGGDELAAVPGDGLVTFARIQTEMNRAGAG CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCEEHHHHHHHHHHCCCC RPALPADANADKLEAIGGALREFLAGNTVKASNMLDDIDAEIDLRVPTDEQVAADPLLAD CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCEEEEECCCCCHHHCCCCCCC KEEWLVSYFELLPDAPQGKGVKADTYVFIRYALTLRKVEAILLAETMPSTKGYDLVARKS HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC EPEPSVFDGMNLRFPCRIVTNHRALLEEAAKRMGPLMGGPLTDCPTPKGRESDFNLLERI CCCCCHHCCCCCEECEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH ARDPAGALTSVSNGHGHLPRDLKTPLMTAAAKGRLADVEKAMKAGADPHRADARGRTALH HCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEH YLLGNQTLPADERAQAIKLLY HHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA