Click here to switch to the map view.

The map label for this gene is 83309972

Identifier: 83309972

GI number: 83309972

Start: 932139

End: 932579

Strand: Reverse

Name: 83309972

Synonym: amb0873

Alternate gene names: NA

Gene position: 932579-932139 (Counterclockwise)

Preceding gene: 83309973

Following gene: 83309969

Centisome position: 18.77

GC content: 63.49

Gene sequence:

>441_bases
ATGATCGTCAAGACCATCTTGAAATCCAAGGCCCGAGGCGGAGGGATCATCTCCGTCACCCCCGAGGCCAGTATCGGCGA
CGCCGCCCGTCTGCTGGCCCAACACAAGATCGGCGCCGTTCTGGTCATGAACGGCGACCGGGTGGCGGGAATCCTGTCGG
AACGCGATATCGTCCGAGGCCTGGCCGACGCGGTGGACGTCTGCATCACCGCCAAGGTGCGGGACCTGATGACCGCCGAG
GTCTTCGTCTGCCACGAGGACGACACCGTCGAACGTCTGATGGAGATCATGACCGCCAAGCGCATCCGTCACTTGCCGGT
GATGGACAACAACGGCGACGTGGCCGGCATCGTCACCATCGGCGACGTGGTGAAGTCCCGGCTGGACGAAACCAAGATGG
AAGCGGAATCCCTGCGCGATTACGTGATGGCGGGGCGCTGA

Upstream 100 bases:

>100_bases
CAAGCTCCTATACTGATGCCCCCCTCCCTTGAAGGGACTTCCCCCTGCCCCAATCTGTGAGGGGGAGAGCCTGAAGATCC
CATAGCGAGGGAGGGTGCGC

Downstream 100 bases:

>100_bases
GGCCCGTCAGGTGATGACTCAGGCCTAGCGCAGTTGCCATTCCTGCGCCGGGCCCGAGGACAGCCCAAAGCGGAAGTGCG
GGCACTCGCCATCCCGGTCG

Product: CBS domain-containing protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIVKTILKSKARGGGIISVTPEASIGDAARLLAQHKIGAVLVMNGDRVAGILSERDIVRGLADAVDVCITAKVRDLMTAE
VFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVKSRLDETKMEAESLRDYVMAGR

Sequences:

>Translated_146_residues
MIVKTILKSKARGGGIISVTPEASIGDAARLLAQHKIGAVLVMNGDRVAGILSERDIVRGLADAVDVCITAKVRDLMTAE
VFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVKSRLDETKMEAESLRDYVMAGR
>Mature_146_residues
MIVKTILKSKARGGGIISVTPEASIGDAARLLAQHKIGAVLVMNGDRVAGILSERDIVRGLADAVDVCITAKVRDLMTAE
VFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVKSRLDETKMEAESLRDYVMAGR

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15801; Mature: 15801

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKTILKSKARGGGIISVTPEASIGDAARLLAQHKIGAVLVMNGDRVAGILSERDIVRG
CHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHH
LADAVDVCITAKVRDLMTAEVFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTI
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEH
GDVVKSRLDETKMEAESLRDYVMAGR
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVKTILKSKARGGGIISVTPEASIGDAARLLAQHKIGAVLVMNGDRVAGILSERDIVRG
CHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECCCEEEHHHHHHHHHHH
LADAVDVCITAKVRDLMTAEVFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTI
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEH
GDVVKSRLDETKMEAESLRDYVMAGR
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA