| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309899
Identifier: 83309899
GI number: 83309899
Start: 857818
End: 858927
Strand: Reverse
Name: 83309899
Synonym: amb0800
Alternate gene names: NA
Gene position: 858927-857818 (Counterclockwise)
Preceding gene: 83309900
Following gene: 83309898
Centisome position: 17.29
GC content: 71.44
Gene sequence:
>1110_bases ATGAGCTGGCTGGTCTATCGCCTGACCGGCTCGGCGGTGCTGCTGGGCGTCACCGCCTTTCTGTCCCAGGCGCCGCAGTT GGTGATCTCGCCCCTGGCCGGGTTGTTCATCGACCGCTTCGACCGCCGCCGCCTGTTCCTGTGCGTCCAGGCGCTGATGA TCGCCCAGGCGGCCCTGCTGGCGGCCATCACCGCCCTGGGGGTGGTGACGCCGGCCCATCTGGTGGGGCTGGCGGCGCTG TTCGGCGTGCTCAACAGCGTCGACACGCCGCTGCGCCAATCCATGCTGGGGGGCATGGTCGAGGACCGCGCCCTGCTGCG CAACGCCATTGCGCTGAACGCCTCGCTGTTCAATTCGGCGCGCTTCGTCGGCCCGCCGCTGGCCGGGCTGATCTTGTCCT TCACCTCGGAAAGCTGGTGCTTCGCCATCAATGCCGCCTCGTTCCTGGGCGTGGCCTTCGCCGTCTGGCGCCAGCCGCCC CAGCCGCCCTCCGGGGCCTCGGGGGGAATGGCCGAGGCCTTTCGCCAGGGGCTGGCCTTCGCCTGGAACAACCAGACCAT CCGGACGCTGTTGTTCAGTGTGGCGGCACTCAATCTGGCGGGCTCGGCCTATGGGGTGCTGATGCCCATCCTGGCCAAGG AGGGGTTCGCCGGCGATGCCAGCACCCTGGGCTGGCTGCTGGGCGCCACCGGCGGCGGGGCGCTGGCCGCCACCCTGCTG GTGGCCACCCGCCAGCGCCTGGAGCAGCTTTTGCGGCTGGTGATCATGGGCTGGGGCTGCGCGGCGCTGGGGCTGGGCGG ATTGGGCCTCAGTCCCAGCCTGACGCCCGCCCTGGCGGCGGCGTTCTGCATCGGGCTGGGGATCAGCTCGGTCAACGTCT CCACCAACGCCCTGCTGCAATCCATGGCGCCCGACGCCATTCGCGGCCGGGTGATTTCCTACTTCACGGCGCTGCGCTTC GGCATGGATGCCCTGGGCGGGCTGGCGGCGGGCGCCATGGCCGCCGGGCTGGGCGTCGCCGGGACATTGGGGCTGGAGGC CGGACTGGTGGCGGCGGGCGCCCTGGCCATGGCCACCCTCTCCCGGCGGATCAAGGCCACCGAGGCCTGA
Upstream 100 bases:
>100_bases CCGGCATAAGGCCTTCGCCGCCCTCGGAGCCCCCCGCTTCCGCCGCTTCTTCGCGGGTCAGGCGCTGTCCATCCTGGGAA CCTGGGTGCAGAGCGTCGCC
Downstream 100 bases:
>100_bases TGACAGCTCCCGGGGTCCGGCCTATGATCGGCGCCAGTCAGGCAATAGGGTGAGGACACAATGGCCGGGGCGAATTTTTC TTTGGCGGGCAAGCGGGTGT
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Family Transporter Protein; Permease; Transporter Facilitator Family; Arabinose Efflux Permease; Facilitator Superfamily Transporter; Integral Membrane Efflux Protein; Transporter-Like Membrane Protein; Macrolide-Efflux Protein; Permeases Of Facilitator Superfamily
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFIDRFDRRRLFLCVQALMIAQAALLAAITALGVVTPAHLVGLAAL FGVLNSVDTPLRQSMLGGMVEDRALLRNAIALNASLFNSARFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWRQPP QPPSGASGGMAEAFRQGLAFAWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEGFAGDASTLGWLLGATGGGALAATLL VATRQRLEQLLRLVIMGWGCAALGLGGLGLSPSLTPALAAAFCIGLGISSVNVSTNALLQSMAPDAIRGRVISYFTALRF GMDALGGLAAGAMAAGLGVAGTLGLEAGLVAAGALAMATLSRRIKATEA
Sequences:
>Translated_369_residues MSWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFIDRFDRRRLFLCVQALMIAQAALLAAITALGVVTPAHLVGLAAL FGVLNSVDTPLRQSMLGGMVEDRALLRNAIALNASLFNSARFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWRQPP QPPSGASGGMAEAFRQGLAFAWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEGFAGDASTLGWLLGATGGGALAATLL VATRQRLEQLLRLVIMGWGCAALGLGGLGLSPSLTPALAAAFCIGLGISSVNVSTNALLQSMAPDAIRGRVISYFTALRF GMDALGGLAAGAMAAGLGVAGTLGLEAGLVAAGALAMATLSRRIKATEA >Mature_368_residues SWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFIDRFDRRRLFLCVQALMIAQAALLAAITALGVVTPAHLVGLAALF GVLNSVDTPLRQSMLGGMVEDRALLRNAIALNASLFNSARFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWRQPPQ PPSGASGGMAEAFRQGLAFAWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEGFAGDASTLGWLLGATGGGALAATLLV ATRQRLEQLLRLVIMGWGCAALGLGGLGLSPSLTPALAAAFCIGLGISSVNVSTNALLQSMAPDAIRGRVISYFTALRFG MDALGGLAAGAMAAGLGVAGTLGLEAGLVAAGALAMATLSRRIKATEA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37714; Mature: 37583
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFIDRFDRRRLFLCVQALMIAQAALL CCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAITALGVVTPAHLVGLAALFGVLNSVDTPLRQSMLGGMVEDRALLRNAIALNASLFNSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWRQPPQPPSGASGGMAEAFRQGLAF HHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEE AWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEGFAGDASTLGWLLGATGGGALAATLL EECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH VATRQRLEQLLRLVIMGWGCAALGLGGLGLSPSLTPALAAAFCIGLGISSVNVSTNALLQ HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH SMAPDAIRGRVISYFTALRFGMDALGGLAAGAMAAGLGVAGTLGLEAGLVAAGALAMATL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SRRIKATEA HHHHHHCCC >Mature Secondary Structure SWLVYRLTGSAVLLGVTAFLSQAPQLVISPLAGLFIDRFDRRRLFLCVQALMIAQAALL CEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAITALGVVTPAHLVGLAALFGVLNSVDTPLRQSMLGGMVEDRALLRNAIALNASLFNSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC RFVGPPLAGLILSFTSESWCFAINAASFLGVAFAVWRQPPQPPSGASGGMAEAFRQGLAF HHCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEE AWNNQTIRTLLFSVAALNLAGSAYGVLMPILAKEGFAGDASTLGWLLGATGGGALAATLL EECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH VATRQRLEQLLRLVIMGWGCAALGLGGLGLSPSLTPALAAAFCIGLGISSVNVSTNALLQ HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH SMAPDAIRGRVISYFTALRFGMDALGGLAAGAMAAGLGVAGTLGLEAGLVAAGALAMATL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SRRIKATEA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA