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The map label for this gene is yfdE [H]

Identifier: 83309821

GI number: 83309821

Start: 782703

End: 784160

Strand: Reverse

Name: yfdE [H]

Synonym: amb0722

Alternate gene names: 83309821

Gene position: 784160-782703 (Counterclockwise)

Preceding gene: 83309822

Following gene: 83309819

Centisome position: 15.79

GC content: 71.19

Gene sequence:

>1458_bases
ATGTCGGCGCAATTGGAGAAGCCTGCGGCCAGGGCGTTGGCCGAATTGCTGGCACTGGGCGGGCTGTCCGACCGGCCGGG
CGGGACCATCGACATCACCGGGCAGGATCCCTACTTTCCCACCACCCACCGGGTGGGCGAGGCCGCCGCCGCAATCCTGG
CGGCCCAGGGTGCCGCCATCGCCGAGATCTGGCGCCGGCGCAGCGGACGAAGGCAGCATGTGGCGGTGGATGTGGGCGCC
GCGGCGCTTTCCCTGGAATCCGTGACCCTGATGACCCGGCGCGGCTATACGGTGCCCTATACCGACATCAACTATCCCCT
GACCAATTTCCATCCGACGCGGGACGGCCGGGCCATTCATCTTCATGCCGGCTACCCCCACCTGCGCAACGGCCTGCTGG
AACTGCTGGACTGTCCCAACAGCATCGAGCGCATCCGCGCCAAGGTGGCGCAGTGGAATGCCTTCGAGCTGGAGGATGCC
ATCGCCGCGCGGGGCCTGTGCGGCAACGTCGCCCGTACCCGCCAGGAATGGCTGGACCATCCCCAGGGCGCCTGGCTGGC
CGCCCAGCCGGTGGTCAGCGTCGAGCGCATCGGCGACAGCCCGCCCGAACCGTTGAAGCCCGCGGCCCGCCCCCTGTCCG
GCATCCGGGTCATCGACCTCACCGACGTGCTGGCCGGGCCGACCGCCACCCGGACCCTGGCCGAACAGGGCGCCACCGTG
CTGCGCATCCGCCCGCCGGACCGCCCGATCATTCCCGCCTTCATCCTGGACACCGGCCACGGCAAGCTGTCCACGGTGAT
GGACCTGAAGCGCCAGCCCGAGGCCGCCCGCATGCGCGCCCTGCTGGCCGAGGCCGACATCTTCGCCCAGAACTACCGCC
CCGGCGCCGTCGCCGGGCTGGGATTCTCGGTCGAGGACGCGGTGAAGCTGCGGCCCGGCATCATCTGCATGTCGCTCAGC
TGTTTCGGCGAGGGCGGACCGTGGAACGGCAGACGGGGCTGGGAACAACTGGCCCAGGCGGCGTCGGGCATGGCCGTGGC
CGACGGCTCCATCGCCGAGCCCCGGGTCAGCCCGGTCATTCCCACCGATTACACCACGGGCTATCTGGCCGCCTATGGCA
TGGCCGTGGCGCTGCTGCGCCGGGCAACGGAGGGCGGCAGCTACCACGTGCGGGTCTCGCTGTCGCGAACCGCCCTGTGG
ATTCAGTCCCTGGGCGGCATCGGCGCCAAGCCGGCCGGCATCACCGTGCCGCCCGAGACCATCCGCGCCCTGGAAACCAC
CCGCGACACGCCGGAAGGCCGCCTGCGCTTCCTGGGGCCGGTGGCGCGCTTCGAGGAGACCCGGGCCTATTGGGAGCTTC
CCTCCCCGCCCATGGCGGCCCACGAACCGGTCTGGCCCCTGATGCCCTCGCAGCCCGACGGGCCGGCGGTGCCGGTGGAC
TTCTCCGTGCCACGCTAA

Upstream 100 bases:

>100_bases
TTTCTCCGGAAACAGCTATAGGGTAAACAGCGTAGCCGAGTGATACGTCCATATGGCGTATGAGCTACTTATAGCTGTAA
AATAGCCGGAGAAAAGCGCG

Downstream 100 bases:

>100_bases
TCCGCCCCGAACACCTCGGGAAAGGTGGCCATCAGGGCACAGTCCACATCATCCATGGTGGGGGTCAGGCCCAGATCCCA
CAAGGAGGTGACGCCGTGCT

Product: acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSAQLEKPAARALAELLALGGLSDRPGGTIDITGQDPYFPTTHRVGEAAAAILAAQGAAIAEIWRRRSGRRQHVAVDVGA
AALSLESVTLMTRRGYTVPYTDINYPLTNFHPTRDGRAIHLHAGYPHLRNGLLELLDCPNSIERIRAKVAQWNAFELEDA
IAARGLCGNVARTRQEWLDHPQGAWLAAQPVVSVERIGDSPPEPLKPAARPLSGIRVIDLTDVLAGPTATRTLAEQGATV
LRIRPPDRPIIPAFILDTGHGKLSTVMDLKRQPEAARMRALLAEADIFAQNYRPGAVAGLGFSVEDAVKLRPGIICMSLS
CFGEGGPWNGRRGWEQLAQAASGMAVADGSIAEPRVSPVIPTDYTTGYLAAYGMAVALLRRATEGGSYHVRVSLSRTALW
IQSLGGIGAKPAGITVPPETIRALETTRDTPEGRLRFLGPVARFEETRAYWELPSPPMAAHEPVWPLMPSQPDGPAVPVD
FSVPR

Sequences:

>Translated_485_residues
MSAQLEKPAARALAELLALGGLSDRPGGTIDITGQDPYFPTTHRVGEAAAAILAAQGAAIAEIWRRRSGRRQHVAVDVGA
AALSLESVTLMTRRGYTVPYTDINYPLTNFHPTRDGRAIHLHAGYPHLRNGLLELLDCPNSIERIRAKVAQWNAFELEDA
IAARGLCGNVARTRQEWLDHPQGAWLAAQPVVSVERIGDSPPEPLKPAARPLSGIRVIDLTDVLAGPTATRTLAEQGATV
LRIRPPDRPIIPAFILDTGHGKLSTVMDLKRQPEAARMRALLAEADIFAQNYRPGAVAGLGFSVEDAVKLRPGIICMSLS
CFGEGGPWNGRRGWEQLAQAASGMAVADGSIAEPRVSPVIPTDYTTGYLAAYGMAVALLRRATEGGSYHVRVSLSRTALW
IQSLGGIGAKPAGITVPPETIRALETTRDTPEGRLRFLGPVARFEETRAYWELPSPPMAAHEPVWPLMPSQPDGPAVPVD
FSVPR
>Mature_484_residues
SAQLEKPAARALAELLALGGLSDRPGGTIDITGQDPYFPTTHRVGEAAAAILAAQGAAIAEIWRRRSGRRQHVAVDVGAA
ALSLESVTLMTRRGYTVPYTDINYPLTNFHPTRDGRAIHLHAGYPHLRNGLLELLDCPNSIERIRAKVAQWNAFELEDAI
AARGLCGNVARTRQEWLDHPQGAWLAAQPVVSVERIGDSPPEPLKPAARPLSGIRVIDLTDVLAGPTATRTLAEQGATVL
RIRPPDRPIIPAFILDTGHGKLSTVMDLKRQPEAARMRALLAEADIFAQNYRPGAVAGLGFSVEDAVKLRPGIICMSLSC
FGEGGPWNGRRGWEQLAQAASGMAVADGSIAEPRVSPVIPTDYTTGYLAAYGMAVALLRRATEGGSYHVRVSLSRTALWI
QSLGGIGAKPAGITVPPETIRALETTRDTPEGRLRFLGPVARFEETRAYWELPSPPMAAHEPVWPLMPSQPDGPAVPVDF
SVPR

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863124, Length=199, Percent_Identity=31.1557788944724, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI300863128, Length=199, Percent_Identity=31.1557788944724, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI300863126, Length=147, Percent_Identity=31.9727891156463, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI266456254, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI42794625, Length=195, Percent_Identity=28.7179487179487, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87082093, Length=205, Percent_Identity=31.7073170731707, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788717, Length=204, Percent_Identity=32.843137254902, Blast_Score=86, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24648431, Length=188, Percent_Identity=30.3191489361702, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24585488, Length=196, Percent_Identity=30.1020408163265, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 52166; Mature: 52035

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQLEKPAARALAELLALGGLSDRPGGTIDITGQDPYFPTTHRVGEAAAAILAAQGAAI
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHH
AEIWRRRSGRRQHVAVDVGAAALSLESVTLMTRRGYTVPYTDINYPLTNFHPTRDGRAIH
HHHHHHCCCCCEEEEEEECHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
LHAGYPHLRNGLLELLDCPNSIERIRAKVAQWNAFELEDAIAARGLCGNVARTRQEWLDH
EECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
PQGAWLAAQPVVSVERIGDSPPEPLKPAARPLSGIRVIDLTDVLAGPTATRTLAEQGATV
CCCCEEECCCCHHHHHCCCCCCCCCCHHHCCCCCEEEEEHHHHHCCCHHHHHHHHCCCEE
LRIRPPDRPIIPAFILDTGHGKLSTVMDLKRQPEAARMRALLAEADIFAQNYRPGAVAGL
EEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC
GFSVEDAVKLRPGIICMSLSCFGEGGPWNGRRGWEQLAQAASGMAVADGSIAEPRVSPVI
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCC
PTDYTTGYLAAYGMAVALLRRATEGGSYHVRVSLSRTALWIQSLGGIGAKPAGITVPPET
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHH
IRALETTRDTPEGRLRFLGPVARFEETRAYWELPSPPMAAHEPVWPLMPSQPDGPAVPVD
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
FSVPR
CCCCC
>Mature Secondary Structure 
SAQLEKPAARALAELLALGGLSDRPGGTIDITGQDPYFPTTHRVGEAAAAILAAQGAAI
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHH
AEIWRRRSGRRQHVAVDVGAAALSLESVTLMTRRGYTVPYTDINYPLTNFHPTRDGRAIH
HHHHHHCCCCCEEEEEEECHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
LHAGYPHLRNGLLELLDCPNSIERIRAKVAQWNAFELEDAIAARGLCGNVARTRQEWLDH
EECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
PQGAWLAAQPVVSVERIGDSPPEPLKPAARPLSGIRVIDLTDVLAGPTATRTLAEQGATV
CCCCEEECCCCHHHHHCCCCCCCCCCHHHCCCCCEEEEEHHHHHCCCHHHHHHHHCCCEE
LRIRPPDRPIIPAFILDTGHGKLSTVMDLKRQPEAARMRALLAEADIFAQNYRPGAVAGL
EEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC
GFSVEDAVKLRPGIICMSLSCFGEGGPWNGRRGWEQLAQAASGMAVADGSIAEPRVSPVI
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCC
PTDYTTGYLAAYGMAVALLRRATEGGSYHVRVSLSRTALWIQSLGGIGAKPAGITVPPET
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHH
IRALETTRDTPEGRLRFLGPVARFEETRAYWELPSPPMAAHEPVWPLMPSQPDGPAVPVD
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
FSVPR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]