| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is maeB [H]
Identifier: 83309819
GI number: 83309819
Start: 779375
End: 781663
Strand: Reverse
Name: maeB [H]
Synonym: amb0720
Alternate gene names: 83309819
Gene position: 781663-779375 (Counterclockwise)
Preceding gene: 83309821
Following gene: 83309818
Centisome position: 15.74
GC content: 66.71
Gene sequence:
>2289_bases ATGAGCATGTCCGACGAGTTGCGCGACGCGGCGCTGGAATACCATCGCCTGCCCACCCCCGGTAAGATCAGCGTCACCCC CACCAAGCCGCTGGCCACCCAGCGCGACCTGGCGCTGGCCTATTCCCCCGGTGTGGCCGCCGCCTGCGAGCTGATCGTCG CCGACGAGGACAGCGCCGCCGATGTGACGGCGCGCGGCAATCTGGTGGCCGTGGTGACCAACGGCACCGCCGTGCTGGGC CTCGGCCCCATCGGCCCCCTGGCCGCCAAGCCGGTGATGGAGGGCAAGGGCGTCCTGTTCAAGAAGTTCGCCGGCATCGA CGTGTTCGACATGGAGCTGGCCGAGCTTGACCCGGACAAGCTGGTGAACATCATCGCCGCCATGGAGCCCACCTTCGGCG CCATCAACCTTGAAGACATCAAGGCCCCCGAGTGTTTCGAGGTCGAGCGCAAGCTGCAGGAGCGGGTGAAGATCCCGGTC ATGCACGACGACCAGCACGGCACCGCCATCGTGGTGGGCGCCGCCATGGTCAACGCGCTGCGCGTGGTGGGCAAGGACAT CGCCGACGTCAAGCTGGTGGCCTCGGGCGCCGGCGCCGCCGCGCTGGCCTGCCTCAACCTGCTGGTCAAGCTGGGCGTCA AGCGCGAGAACGTCTGGGTCACCGACATCAAGGGCGTGGTCTACGAGGGCCGCACCGAGCTGATGGACGAGTACAAGTCC ATCTATGCCAAGAAGACCGACATGCGCACTCTGGCCGAGGTCATCGAGGGCGCCGACATCTTCCTGGGCCTGTCCGCGCC CCGCGTGCTGACCGGCGAGATGGTCGACAAGATGGCGCAAAAGCCCATCGTCTTCGCCCTGGCCAATCCCACCCCGGAAA TCCTGCCCGACGAGGTCAAGGCGGTGCGTCCCGACGCCATCATCGCCACCGGCCGCTCGGACTATCCCAACCAGGTCAAC AACGTCCTGGTGTTCCCCTACATCTTCCGCGGCGCCCTGGACGTGGGCGCCACCGAGATCAACGACGCCATGAAGCTGGC CTGCGTCTATGCGCTGGCCAATCTCGCCATGGCCGAATCCGATGAGCGGGTGCGCGCCGCCTATGGCACCGCGCCACTGA CCTTCGGGCCGGAATACCTGATCCCCAAGCCGTTCGATTCCCGCTTGATCATCAAGATCGCCCCGGCGGTGGCCAAGGCG GCCATGGAATCGGGCGTGGCGCGGCGCCCCATCATCGATTTCGACGTCTACATGGACCGGCTCAACCAGTTCGTGTTCCG CTCTGGCCTGGTGATGAAGCCGGTGTTCGACCGCGCCCGCCAGGACATGCGCCGCGTGGTCTATTGCGAGGGCGAGGGCC GCCGCGTGCTGCATGCCGCCCAGACCGTGGTGGACGAGGGGCTGGCCCGTCCCGTGCTGATCGGCCGCCGCGAAGTGGTG GAAAAGCGCATTCAGGACCTGGACCTGCGCCTGCGCATCGACCAGGACTTCGACCTGTGCGATCCCGAGGACGATCCCCG CTTCAACGAGTACTGGCGCCTTTACCACTCCATCATGGAGCGCCAGGGCGTCAGCCCGGAATACGCCCGCACCGTGGTCC GCACCCGCAACACGGTGATCGGCACCCTGATGCTGAAGCGCAAGGAAGTGGACGCCATGATCTGCGGCACCATCGGCCGC TATGACAAGCACCTGTCCCACATCCTCAACGTCATCGGCACGCGGGAAGGCGTCAAGGTCCCGGCCGCCATGAACCTGCT GATCATGCCGATCGGCACCTTCTTCATCTGCGACACCTATGTGACGCCCGAGCCGACCCCCGAGCAGATCTGCGACATGA CCTTGCTGGCCTCGGAAGAGGTGCGACGCTTCGGTATCGAGCCCAAGGTGGCCTTCCTGTCCCACGCCAATTTCGGCAAC CGCCAGACCGCCTCGGCCCAGCGCCAGCGCGACGCCCTGGCCCTGCTGCGCGAAAAGGCCCCCTATCTGGAGGCCGAGGG CGAGATGCACGGCGACGCGGCCCTGTCCGAGGAAATCCGCACCCGCATCTTCCCCAATTCCAAGCTGAAGGGCGCCGCCA ACCTGCTGGTCATGCCGACGCTGGACGCCGCCAACATCTCGTTCAACCTGCTGAAGGTGGCGGGCGACGCCCTGTCGGTG GGACCGATCCTGATGGGCATCGCCCAGCCCGCCCACGTGCTGACGCCCTCGGCCACGGTGCGCAACATCATCAACATCAC CGCCCTGGCGGCGGTGGATGCCCAGATGCACGCCGGCCGGGGACGGTAG
Upstream 100 bases:
>100_bases TCCGAAATTCATCCGATCAGAGGCTTTGCGCGGCGCCCCCAAGCGAGTATGGTATCGGCCCGGTCCAAGAAATAACATTA CGCCAGAGGTTGCCGTTCCC
Downstream 100 bases:
>100_bases TCAGCTTCCCACCAGGAACCTGTGCGATGATGGCCCCGGATGCTTTTGCCGAAGCATCCGGGGCCATTCTCTTTCGGACG GAGAAGCATCATGCGGGCTT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 762; Mature: 761
Protein sequence:
>762_residues MSMSDELRDAALEYHRLPTPGKISVTPTKPLATQRDLALAYSPGVAAACELIVADEDSAADVTARGNLVAVVTNGTAVLG LGPIGPLAAKPVMEGKGVLFKKFAGIDVFDMELAELDPDKLVNIIAAMEPTFGAINLEDIKAPECFEVERKLQERVKIPV MHDDQHGTAIVVGAAMVNALRVVGKDIADVKLVASGAGAAALACLNLLVKLGVKRENVWVTDIKGVVYEGRTELMDEYKS IYAKKTDMRTLAEVIEGADIFLGLSAPRVLTGEMVDKMAQKPIVFALANPTPEILPDEVKAVRPDAIIATGRSDYPNQVN NVLVFPYIFRGALDVGATEINDAMKLACVYALANLAMAESDERVRAAYGTAPLTFGPEYLIPKPFDSRLIIKIAPAVAKA AMESGVARRPIIDFDVYMDRLNQFVFRSGLVMKPVFDRARQDMRRVVYCEGEGRRVLHAAQTVVDEGLARPVLIGRREVV EKRIQDLDLRLRIDQDFDLCDPEDDPRFNEYWRLYHSIMERQGVSPEYARTVVRTRNTVIGTLMLKRKEVDAMICGTIGR YDKHLSHILNVIGTREGVKVPAAMNLLIMPIGTFFICDTYVTPEPTPEQICDMTLLASEEVRRFGIEPKVAFLSHANFGN RQTASAQRQRDALALLREKAPYLEAEGEMHGDAALSEEIRTRIFPNSKLKGAANLLVMPTLDAANISFNLLKVAGDALSV GPILMGIAQPAHVLTPSATVRNIINITALAAVDAQMHAGRGR
Sequences:
>Translated_762_residues MSMSDELRDAALEYHRLPTPGKISVTPTKPLATQRDLALAYSPGVAAACELIVADEDSAADVTARGNLVAVVTNGTAVLG LGPIGPLAAKPVMEGKGVLFKKFAGIDVFDMELAELDPDKLVNIIAAMEPTFGAINLEDIKAPECFEVERKLQERVKIPV MHDDQHGTAIVVGAAMVNALRVVGKDIADVKLVASGAGAAALACLNLLVKLGVKRENVWVTDIKGVVYEGRTELMDEYKS IYAKKTDMRTLAEVIEGADIFLGLSAPRVLTGEMVDKMAQKPIVFALANPTPEILPDEVKAVRPDAIIATGRSDYPNQVN NVLVFPYIFRGALDVGATEINDAMKLACVYALANLAMAESDERVRAAYGTAPLTFGPEYLIPKPFDSRLIIKIAPAVAKA AMESGVARRPIIDFDVYMDRLNQFVFRSGLVMKPVFDRARQDMRRVVYCEGEGRRVLHAAQTVVDEGLARPVLIGRREVV EKRIQDLDLRLRIDQDFDLCDPEDDPRFNEYWRLYHSIMERQGVSPEYARTVVRTRNTVIGTLMLKRKEVDAMICGTIGR YDKHLSHILNVIGTREGVKVPAAMNLLIMPIGTFFICDTYVTPEPTPEQICDMTLLASEEVRRFGIEPKVAFLSHANFGN RQTASAQRQRDALALLREKAPYLEAEGEMHGDAALSEEIRTRIFPNSKLKGAANLLVMPTLDAANISFNLLKVAGDALSV GPILMGIAQPAHVLTPSATVRNIINITALAAVDAQMHAGRGR >Mature_761_residues SMSDELRDAALEYHRLPTPGKISVTPTKPLATQRDLALAYSPGVAAACELIVADEDSAADVTARGNLVAVVTNGTAVLGL GPIGPLAAKPVMEGKGVLFKKFAGIDVFDMELAELDPDKLVNIIAAMEPTFGAINLEDIKAPECFEVERKLQERVKIPVM HDDQHGTAIVVGAAMVNALRVVGKDIADVKLVASGAGAAALACLNLLVKLGVKRENVWVTDIKGVVYEGRTELMDEYKSI YAKKTDMRTLAEVIEGADIFLGLSAPRVLTGEMVDKMAQKPIVFALANPTPEILPDEVKAVRPDAIIATGRSDYPNQVNN VLVFPYIFRGALDVGATEINDAMKLACVYALANLAMAESDERVRAAYGTAPLTFGPEYLIPKPFDSRLIIKIAPAVAKAA MESGVARRPIIDFDVYMDRLNQFVFRSGLVMKPVFDRARQDMRRVVYCEGEGRRVLHAAQTVVDEGLARPVLIGRREVVE KRIQDLDLRLRIDQDFDLCDPEDDPRFNEYWRLYHSIMERQGVSPEYARTVVRTRNTVIGTLMLKRKEVDAMICGTIGRY DKHLSHILNVIGTREGVKVPAAMNLLIMPIGTFFICDTYVTPEPTPEQICDMTLLASEEVRRFGIEPKVAFLSHANFGNR QTASAQRQRDALALLREKAPYLEAEGEMHGDAALSEEIRTRIFPNSKLKGAANLLVMPTLDAANISFNLLKVAGDALSVG PILMGIAQPAHVLTPSATVRNIINITALAAVDAQMHAGRGR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=396, Percent_Identity=25.7575757575758, Blast_Score=91, Evalue=6e-18, Organism=Homo sapiens, GI62420882, Length=389, Percent_Identity=25.706940874036, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI62420880, Length=389, Percent_Identity=25.706940874036, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI239049447, Length=389, Percent_Identity=25.706940874036, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI4505145, Length=397, Percent_Identity=25.4408060453401, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI270265879, Length=368, Percent_Identity=25.5434782608696, Blast_Score=74, Evalue=7e-13, Organism=Escherichia coli, GI1788806, Length=757, Percent_Identity=62.4834874504623, Blast_Score=963, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=343, Percent_Identity=27.1137026239067, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI1788800, Length=319, Percent_Identity=29.7805642633229, Blast_Score=129, Evalue=6e-31, Organism=Escherichia coli, GI87081919, Length=452, Percent_Identity=23.6725663716814, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=323, Percent_Identity=28.1733746130031, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI281362672, Length=404, Percent_Identity=26.7326732673267, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356279, Length=404, Percent_Identity=26.7326732673267, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI281362674, Length=404, Percent_Identity=26.7326732673267, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646388, Length=396, Percent_Identity=26.5151515151515, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646386, Length=396, Percent_Identity=26.5151515151515, Blast_Score=74, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83272; Mature: 83141
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSDELRDAALEYHRLPTPGKISVTPTKPLATQRDLALAYSPGVAAACELIVADEDSAA CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHEEEEEEECCCCCC DVTARGNLVAVVTNGTAVLGLGPIGPLAAKPVMEGKGVLFKKFAGIDVFDMELAELDPDK CEEECCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCEEEEHHCCCCEEECHHHHCCHHH LVNIIAAMEPTFGAINLEDIKAPECFEVERKLQERVKIPVMHDDQHGTAIVVGAAMVNAL HHHHHHHCCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHH RVVGKDIADVKLVASGAGAAALACLNLLVKLGVKRENVWVTDIKGVVYEGRTELMDEYKS HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHHHHHHH IYAKKTDMRTLAEVIEGADIFLGLSAPRVLTGEMVDKMAQKPIVFALANPTPEILPDEVK HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH AVRPDAIIATGRSDYPNQVNNVLVFPYIFRGALDVGATEINDAMKLACVYALANLAMAES HCCCCEEEECCCCCCCCHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC DERVRAAYGTAPLTFGPEYLIPKPFDSRLIIKIAPAVAKAAMESGVARRPIIDFDVYMDR CCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHH LNQFVFRSGLVMKPVFDRARQDMRRVVYCEGEGRRVLHAAQTVVDEGLARPVLIGRREVV HHHHHHHCCCEEHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCHHHHH EKRIQDLDLRLRIDQDFDLCDPEDDPRFNEYWRLYHSIMERQGVSPEYARTVVRTRNTVI HHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH GTLMLKRKEVDAMICGTIGRYDKHLSHILNVIGTREGVKVPAAMNLLIMPIGTFFICDTY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCEEEEECC VTPEPTPEQICDMTLLASEEVRRFGIEPKVAFLSHANFGNRQTASAQRQRDALALLREKA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC PYLEAEGEMHGDAALSEEIRTRIFPNSKLKGAANLLVMPTLDAANISFNLLKVAGDALSV CCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHH GPILMGIAQPAHVLTPSATVRNIINITALAAVDAQMHAGRGR HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMSDELRDAALEYHRLPTPGKISVTPTKPLATQRDLALAYSPGVAAACELIVADEDSAA CCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHEEEEEEECCCCCC DVTARGNLVAVVTNGTAVLGLGPIGPLAAKPVMEGKGVLFKKFAGIDVFDMELAELDPDK CEEECCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCEEEEHHCCCCEEECHHHHCCHHH LVNIIAAMEPTFGAINLEDIKAPECFEVERKLQERVKIPVMHDDQHGTAIVVGAAMVNAL HHHHHHHCCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHH RVVGKDIADVKLVASGAGAAALACLNLLVKLGVKRENVWVTDIKGVVYEGRTELMDEYKS HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHHHHHHH IYAKKTDMRTLAEVIEGADIFLGLSAPRVLTGEMVDKMAQKPIVFALANPTPEILPDEVK HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH AVRPDAIIATGRSDYPNQVNNVLVFPYIFRGALDVGATEINDAMKLACVYALANLAMAES HCCCCEEEECCCCCCCCHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC DERVRAAYGTAPLTFGPEYLIPKPFDSRLIIKIAPAVAKAAMESGVARRPIIDFDVYMDR CCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEHHHHHHHH LNQFVFRSGLVMKPVFDRARQDMRRVVYCEGEGRRVLHAAQTVVDEGLARPVLIGRREVV HHHHHHHCCCEEHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHCHHHHH EKRIQDLDLRLRIDQDFDLCDPEDDPRFNEYWRLYHSIMERQGVSPEYARTVVRTRNTVI HHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH GTLMLKRKEVDAMICGTIGRYDKHLSHILNVIGTREGVKVPAAMNLLIMPIGTFFICDTY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEECCCEEEEECC VTPEPTPEQICDMTLLASEEVRRFGIEPKVAFLSHANFGNRQTASAQRQRDALALLREKA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC PYLEAEGEMHGDAALSEEIRTRIFPNSKLKGAANLLVMPTLDAANISFNLLKVAGDALSV CCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHH GPILMGIAQPAHVLTPSATVRNIINITALAAVDAQMHAGRGR HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]