| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309822
Identifier: 83309822
GI number: 83309822
Start: 784331
End: 785158
Strand: Reverse
Name: 83309822
Synonym: amb0723
Alternate gene names: NA
Gene position: 785158-784331 (Counterclockwise)
Preceding gene: 83309823
Following gene: 83309821
Centisome position: 15.81
GC content: 63.65
Gene sequence:
>828_bases ATGGCGATGCTTGAACTGACCGACGACCTGCGAATCGGCCATCCGGTGATCGATGCCGATCACCAGCGGCTGATCGAGAT CATCAACGAGTTTCTCGAACACTCGAAAGCCGCGGACAATTCGCAGGTCCTGCACGAGACGCTGAAATCCCTGCTGGCTT ATGGCCGGGACCACTTCAGCCGCGAGGAGCGCATTCAGCGCCAGTGCCTGTATCCCCTTCAACCGGGCCATTTCCACGAG CACAAAGCCTTGCTGGATCAGGTGCGCGAGATCGCCCGGGCCTATTTCATCGCCAAGACCAAGCCCCTGAACGAGTCCTC GGTGCTGGAGGTCAACGAGTTGCTCAAGGCCTGGCTGATCGGCCACGTCAAGAAATTCGACACCGGCATGCGCGACTGGG TGGCGCCCCCCAAGGACCCGGACGCCGCCCCGGAAAAGCTGGCGTCCCACGATCTGGCCGCCCTGGTCATCGATTCCGAT GCCGCCCGCCGGGGACGTCTGGCCGATCTGCTGACCGGCCTGGGAGCGGCCAGGGTGCTGCAGGCTGAGGACGGCATCAA GGGGCTGGCCATGGCCTTCGGCGATCCGGTTCCCGACTTCATCATCTGCGACCTGGAAGCCGAGCCCCTGGACGGCTCCG CTCTGGCCGGAGCGCTGCGCGGCAGCAACAAGGCCTACATCGCCCGCATTCCGCTGCTGCTGCTGAGCGATACCGACGAC GCCGACCTCATCCAGAAAGTGATGGAGGCCGGCGCCACCGGCCTTTACCCCAAAGCCTTCAATCCCAAGAACCTTGGGCG CCTGCTCAACCACCTGGTCAAAGGCTAA
Upstream 100 bases:
>100_bases CGACAACTGGCTGACCATGCTGAAGATCGGCTACGCCTACTAGCTCTCTCCCCGGGGCATACGATAGATTCCAAGGGATC CATCAGCGCTCCGGGGGGAC
Downstream 100 bases:
>100_bases GGCAGCCCTTTGTCCAATGCATCGATTAAGTGTATGCATTTAAGTATATACCCGCTTGACCATTCTTTTGTTTCTCCGGA AACAGCTATAGGGTAAACAG
Product: hemerythrin
Products: NA
Alternate protein names: Hemerythrin-Like Protein; Hemerythrin
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHE HKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSD AARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG
Sequences:
>Translated_275_residues MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHE HKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSD AARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG >Mature_274_residues AMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFSREERIQRQCLYPLQPGHFHEH KALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLIGHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDA ARRGRLADLLTGLGAARVLQAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDDA DLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30308; Mature: 30177
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFS CCCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC REERIQRQCLYPLQPGHFHEHKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDAARRGRLADLLTGLGAARVL HHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH QAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD HHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECEEEECCCCC ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AMLELTDDLRIGHPVIDADHQRLIEIINEFLEHSKAADNSQVLHETLKSLLAYGRDHFS CCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC REERIQRQCLYPLQPGHFHEHKALLDQVREIARAYFIAKTKPLNESSVLEVNELLKAWLI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GHVKKFDTGMRDWVAPPKDPDAAPEKLASHDLAALVIDSDAARRGRLADLLTGLGAARVL HHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCHHHHHH QAEDGIKGLAMAFGDPVPDFIICDLEAEPLDGSALAGALRGSNKAYIARIPLLLLSDTDD HHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECEEEECCCCC ADLIQKVMEAGATGLYPKAFNPKNLGRLLNHLVKG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA