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The map label for this gene is ugpQ [H]

Identifier: 83309626

GI number: 83309626

Start: 569244

End: 569948

Strand: Reverse

Name: ugpQ [H]

Synonym: amb0527

Alternate gene names: 83309626

Gene position: 569948-569244 (Counterclockwise)

Preceding gene: 83309627

Following gene: 83309625

Centisome position: 11.47

GC content: 71.49

Gene sequence:

>705_bases
ATGCTGATCGGCCATCGCGGCCTGGCCGGGCTGGCGCCCGAGAACACCCTGGCCTCGTTCAGGACCGCCGCCGCCCATGG
CCTCGCCATGGTGGAGTTCGATGTGCGCCTGTCCCGGGACGGCGTGCCGCTGGTCTTCCATGACGACACCCTGGAGCGCA
CCACCAGCGGCACCGGCCCGGTGGCGGAGCGCAACTGGGCCGAAATCGCCGGGCTCGATGCCGGATCGTGGTTCGCCCCC
GCCTTCGCCGGAGAGTGCGTGCCCAGCCTGGAGCAGGTGCTGGGCCTCTGCCTGGACCTGGGGCTGGGGATCAACCTGGA
GATCAAGCCCGACGAGGGGCGCGAGGCCGAGACCGCCGAGGCGGCGCTGGCCCTGGCCCTTCGCCTGTGGCCCGAAAGCG
TATCGGCGCCGGTGATCTCCAGCTTTGAGACCATCTGTCTGGACGTTGCCCGGCGCGTCGCCCCCCACTGGCCCCGCGCT
TTGCTGGCCGAGGCGCTGCCCGATGACTGGCGCGAGCAGGCTACACGGCTGGAGGCGTCCGCGCTGCACCTCGACCACCG
TACCCTGGACGCCGACGTGGTGACCGGCATCATGGCCGCCGGCCTGCCGGCGCGGGCCTATACGGTCAACGACCCGGCCC
GCGCCCGGATCTTGGGCCACTGGGGCGTCGCCGCCGTCTTCGCCGATTTTCCTCATTCGTCATGA

Upstream 100 bases:

>100_bases
CGGCCATGAATCACCGCAGCACCGCCTGCACCGACGCCGCGTGCATGCGGGCCATTTCGGTGGAGCAGGTCCTCGACGCG
GTCAAGCGCCTGCTGGGATG

Downstream 100 bases:

>100_bases
GTCCGTAACGTCACTGTGGCGCGGCACGACAAAGGGCTATATATGTGCCGTCATCGGCAGGCCTGGGAGAGCCCGTCGTA
GCCATCCGAGGAGTTACCCC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLIGHRGLAGLAPENTLASFRTAAAHGLAMVEFDVRLSRDGVPLVFHDDTLERTTSGTGPVAERNWAEIAGLDAGSWFAP
AFAGECVPSLEQVLGLCLDLGLGINLEIKPDEGREAETAEAALALALRLWPESVSAPVISSFETICLDVARRVAPHWPRA
LLAEALPDDWREQATRLEASALHLDHRTLDADVVTGIMAAGLPARAYTVNDPARARILGHWGVAAVFADFPHSS

Sequences:

>Translated_234_residues
MLIGHRGLAGLAPENTLASFRTAAAHGLAMVEFDVRLSRDGVPLVFHDDTLERTTSGTGPVAERNWAEIAGLDAGSWFAP
AFAGECVPSLEQVLGLCLDLGLGINLEIKPDEGREAETAEAALALALRLWPESVSAPVISSFETICLDVARRVAPHWPRA
LLAEALPDDWREQATRLEASALHLDHRTLDADVVTGIMAAGLPARAYTVNDPARARILGHWGVAAVFADFPHSS
>Mature_234_residues
MLIGHRGLAGLAPENTLASFRTAAAHGLAMVEFDVRLSRDGVPLVFHDDTLERTTSGTGPVAERNWAEIAGLDAGSWFAP
AFAGECVPSLEQVLGLCLDLGLGINLEIKPDEGREAETAEAALALALRLWPESVSAPVISSFETICLDVARRVAPHWPRA
LLAEALPDDWREQATRLEASALHLDHRTLDADVVTGIMAAGLPARAYTVNDPARARILGHWGVAAVFADFPHSS

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=142, Percent_Identity=35.2112676056338, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI284055245, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI284055240, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI284055242, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI21361649, Length=85, Percent_Identity=45.8823529411765, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI189571657, Length=85, Percent_Identity=44.7058823529412, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI33457301, Length=86, Percent_Identity=41.8604651162791, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789858, Length=228, Percent_Identity=42.9824561403509, Blast_Score=184, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17561436, Length=114, Percent_Identity=35.9649122807018, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17542344, Length=141, Percent_Identity=31.2056737588652, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 24997; Mature: 24997

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIGHRGLAGLAPENTLASFRTAAAHGLAMVEFDVRLSRDGVPLVFHDDTLERTTSGTGP
CEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCC
VAERNWAEIAGLDAGSWFAPAFAGECVPSLEQVLGLCLDLGLGINLEIKPDEGREAETAE
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
AALALALRLWPESVSAPVISSFETICLDVARRVAPHWPRALLAEALPDDWREQATRLEAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH
ALHLDHRTLDADVVTGIMAAGLPARAYTVNDPARARILGHWGVAAVFADFPHSS
HHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCHHEEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLIGHRGLAGLAPENTLASFRTAAAHGLAMVEFDVRLSRDGVPLVFHDDTLERTTSGTGP
CEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCC
VAERNWAEIAGLDAGSWFAPAFAGECVPSLEQVLGLCLDLGLGINLEIKPDEGREAETAE
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
AALALALRLWPESVSAPVISSFETICLDVARRVAPHWPRALLAEALPDDWREQATRLEAS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH
ALHLDHRTLDADVVTGIMAAGLPARAYTVNDPARARILGHWGVAAVFADFPHSS
HHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCHHEEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]