| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309625
Identifier: 83309625
GI number: 83309625
Start: 567742
End: 569199
Strand: Reverse
Name: 83309625
Synonym: amb0526
Alternate gene names: NA
Gene position: 569199-567742 (Counterclockwise)
Preceding gene: 83309626
Following gene: 83309623
Centisome position: 11.46
GC content: 64.81
Gene sequence:
>1458_bases GTGCCGTCATCGGCAGGCCTGGGAGAGCCCGTCGTAGCCATCCGAGGAGTTACCCCTGACGTGAAAGCGCTCGATCCTAT CCTGATTTCCGGTCGCGAGGTCCTGCCCCTGGTCGAGGGCGGCAAGGGGATCAACGTCTCCAATGGCGAGAGTTCTGGCG CCTGGGCGGCTGCCGGCGGCGTCGCCACCTTCTCCGGAGTCAATGCCGATCTCTATGACGAGAACGGCAACCGCATCGAC ATGGTCTATCACGGCAAGACCAGGACCGAGAAACACCACGAGCTGATCGCCTACGGCATCAGGGGCGGCATCGCCCAGGC CCGCATCGCCCACGACATCGCCGGCGGCAATGGCCGCATCCACATGAATGTGCTGTGGGAGATGGGCGGCGCCGAGCAGA TCCTCGAAGGCGTGCTGGACGGCGCCAAGGGCCTGATCCATGGCGTGACCTGCGGTGCCGGCATGCCCTATCGCGTGGCC GAGATCGCGGCCCGCTATAACGTCTATTACTATCCCATCGTGTCGTCGGCCCGCGCCTTCCGCGCCCTGTGGAAGCGTGC CTACCACAAGTACGGCGAATTGCTGGGCGGCGTGGTCTACGAGGACCCCTGGCTGGCCGGCGGCCATAACGGCCTGTCCA ATTCCGAAGACCCGAGGAAGCCCGAGCCCCCCTATGGCCGCGTCGCCGAGCTGCGCAAGACCATGGTGGAATGCGGCCTG GGCAACGTGCCGATCTTCATGGCCGGCGGCGTCTGGTGGCTGAAGGAATGGGAGGACTGGATCGGCAACCCCGAACTGGG TCCCATCGCCTTCCAGTACGGCACCCGTCCGCTGCTGACCCAGGAAAGCCCCATCTCCGACGCCTGGAAGCAGCGCCTGC TGACGCTGAAGCCCGGCGACGTGCTGCTGCACCATTTCAGCCCCACCGGCTTCTACTCCTCGGCGGTGAAGAACGACTTC ATCAACGAGCTGTGCCAGCGGCTGGACCACCAGATCCCCTATTCCAGCGAATGCGTCGGCGATCACGAGGCCGAGCTGCC CATCGGCGCCCGCAAGCGCATCGTCTGGGTCACACCCCACGACCGCGACCGGGCGCTGGGCTGGATGAACGAGGGCTTTA CCGAGGCGCTGCGCACCCCCGATTCGACCCTGATCTTCGTCACCCCCGACAAGGCCGAGGAAATCCGCGTCGATCAGGTC AAGTGCATGGGCTGCCTGTCCCAGTGCATGTTCTCCAACTGGGCTCAGAACGAGGCCGGGACCACCGGCAAGAAGGCCGA CCCGCGCAGCTTCTGTATCCAGAAGACCCTGCAGAACATCGGCCATGGCGGCGACGTGGAAAACGAACTGATGTTCGCCG GCCACAACGCCTATCGCTTCGGCGCCGATCCCTTCTACAAGAACGGCTTCATCCCGACTGTCAAGCAACTGGTGGACCGC ATCGCCACCGGCGAATAG
Upstream 100 bases:
>100_bases TCTTGGGCCACTGGGGCGTCGCCGCCGTCTTCGCCGATTTTCCTCATTCGTCATGAGTCCGTAACGTCACTGTGGCGCGG CACGACAAAGGGCTATATAT
Downstream 100 bases:
>100_bases GAATTGTCATCCCGAGCGTAGCCGAGGGATCTCGTCCTGGCACGGCGCGTCCAAATTGGCGGCGACGGAGCAAGCGGAGA TTCCTCGCGACGCTCGGAAT
Product: 2-nitropropane dioxygenase-like protein
Products: acetone; nitrite
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase Family Protein
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MPSSAGLGEPVVAIRGVTPDVKALDPILISGREVLPLVEGGKGINVSNGESSGAWAAAGGVATFSGVNADLYDENGNRID MVYHGKTRTEKHHELIAYGIRGGIAQARIAHDIAGGNGRIHMNVLWEMGGAEQILEGVLDGAKGLIHGVTCGAGMPYRVA EIAARYNVYYYPIVSSARAFRALWKRAYHKYGELLGGVVYEDPWLAGGHNGLSNSEDPRKPEPPYGRVAELRKTMVECGL GNVPIFMAGGVWWLKEWEDWIGNPELGPIAFQYGTRPLLTQESPISDAWKQRLLTLKPGDVLLHHFSPTGFYSSAVKNDF INELCQRLDHQIPYSSECVGDHEAELPIGARKRIVWVTPHDRDRALGWMNEGFTEALRTPDSTLIFVTPDKAEEIRVDQV KCMGCLSQCMFSNWAQNEAGTTGKKADPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFGADPFYKNGFIPTVKQLVDR IATGE
Sequences:
>Translated_485_residues MPSSAGLGEPVVAIRGVTPDVKALDPILISGREVLPLVEGGKGINVSNGESSGAWAAAGGVATFSGVNADLYDENGNRID MVYHGKTRTEKHHELIAYGIRGGIAQARIAHDIAGGNGRIHMNVLWEMGGAEQILEGVLDGAKGLIHGVTCGAGMPYRVA EIAARYNVYYYPIVSSARAFRALWKRAYHKYGELLGGVVYEDPWLAGGHNGLSNSEDPRKPEPPYGRVAELRKTMVECGL GNVPIFMAGGVWWLKEWEDWIGNPELGPIAFQYGTRPLLTQESPISDAWKQRLLTLKPGDVLLHHFSPTGFYSSAVKNDF INELCQRLDHQIPYSSECVGDHEAELPIGARKRIVWVTPHDRDRALGWMNEGFTEALRTPDSTLIFVTPDKAEEIRVDQV KCMGCLSQCMFSNWAQNEAGTTGKKADPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFGADPFYKNGFIPTVKQLVDR IATGE >Mature_484_residues PSSAGLGEPVVAIRGVTPDVKALDPILISGREVLPLVEGGKGINVSNGESSGAWAAAGGVATFSGVNADLYDENGNRIDM VYHGKTRTEKHHELIAYGIRGGIAQARIAHDIAGGNGRIHMNVLWEMGGAEQILEGVLDGAKGLIHGVTCGAGMPYRVAE IAARYNVYYYPIVSSARAFRALWKRAYHKYGELLGGVVYEDPWLAGGHNGLSNSEDPRKPEPPYGRVAELRKTMVECGLG NVPIFMAGGVWWLKEWEDWIGNPELGPIAFQYGTRPLLTQESPISDAWKQRLLTLKPGDVLLHHFSPTGFYSSAVKNDFI NELCQRLDHQIPYSSECVGDHEAELPIGARKRIVWVTPHDRDRALGWMNEGFTEALRTPDSTLIFVTPDKAEEIRVDQVK CMGCLSQCMFSNWAQNEAGTTGKKADPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFGADPFYKNGFIPTVKQLVDRI ATGE
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.13.11.32
Molecular weight: Translated: 53148; Mature: 53017
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSAGLGEPVVAIRGVTPDVKALDPILISGREVLPLVEGGKGINVSNGESSGAWAAAGG CCCCCCCCCCEEEEECCCCCHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCC VATFSGVNADLYDENGNRIDMVYHGKTRTEKHHELIAYGIRGGIAQARIAHDIAGGNGRI CEEECCCCCEEECCCCCEEEEEECCCCCCCHHHHHHEEHHCCCHHHHHHHHHHCCCCCEE HMNVLWEMGGAEQILEGVLDGAKGLIHGVTCGAGMPYRVAEIAARYNVYYYPIVSSARAF EEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCEEEEEHHHHHHHH RALWKRAYHKYGELLGGVVYEDPWLAGGHNGLSNSEDPRKPEPPYGRVAELRKTMVECGL HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GNVPIFMAGGVWWLKEWEDWIGNPELGPIAFQYGTRPLLTQESPISDAWKQRLLTLKPGD CCCCEEEECCEEEHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCEEEECCCC VLLHHFSPTGFYSSAVKNDFINELCQRLDHQIPYSSECVGDHEAELPIGARKRIVWVTPH EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC DRDRALGWMNEGFTEALRTPDSTLIFVTPDKAEEIRVDQVKCMGCLSQCMFSNWAQNEAG CCCHHHCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTGKKADPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFGADPFYKNGFIPTVKQLVDR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHH IATGE HHCCC >Mature Secondary Structure PSSAGLGEPVVAIRGVTPDVKALDPILISGREVLPLVEGGKGINVSNGESSGAWAAAGG CCCCCCCCCEEEEECCCCCHHHCCCEEECCCEEEEEEECCCCCCCCCCCCCCCEEECCC VATFSGVNADLYDENGNRIDMVYHGKTRTEKHHELIAYGIRGGIAQARIAHDIAGGNGRI CEEECCCCCEEECCCCCEEEEEECCCCCCCHHHHHHEEHHCCCHHHHHHHHHHCCCCCEE HMNVLWEMGGAEQILEGVLDGAKGLIHGVTCGAGMPYRVAEIAARYNVYYYPIVSSARAF EEEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCEEEEEHHHHHHHH RALWKRAYHKYGELLGGVVYEDPWLAGGHNGLSNSEDPRKPEPPYGRVAELRKTMVECGL HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GNVPIFMAGGVWWLKEWEDWIGNPELGPIAFQYGTRPLLTQESPISDAWKQRLLTLKPGD CCCCEEEECCEEEHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCEEEECCCC VLLHHFSPTGFYSSAVKNDFINELCQRLDHQIPYSSECVGDHEAELPIGARKRIVWVTPH EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCC DRDRALGWMNEGFTEALRTPDSTLIFVTPDKAEEIRVDQVKCMGCLSQCMFSNWAQNEAG CCCHHHCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC TTGKKADPRSFCIQKTLQNIGHGGDVENELMFAGHNAYRFGADPFYKNGFIPTVKQLVDR CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHH IATGE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-nitropropane; O2
Specific reaction: 2 2-nitropropane + O2 = 2 acetone + 2 nitrite
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA