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The map label for this gene is ythA [H]

Identifier: 82750696

GI number: 82750696

Start: 1032314

End: 1033675

Strand: Direct

Name: ythA [H]

Synonym: SAB0952

Alternate gene names: 82750696

Gene position: 1032314-1033675 (Clockwise)

Preceding gene: 82750694

Following gene: 82750697

Centisome position: 37.64

GC content: 34.07

Gene sequence:

>1362_bases
ATGGATACAGTTGAAATCAGTCGGTTTTTGACAGCTATGACTTTAGCAGTTCATATCATTTTTGCAACGATTGGTGTTGG
TATGCCTTTAATGTTCGCAATTGCAGAATTTTTAGGTATTCGCAAAAATGATCTTCAATATATAGCTATGGCCAAAAGAT
GGGCTAAAGCTTATACAATTACTGTAGCAGTGGGAGTTGTTACAGGTACAATTATAGGACTTCAATTATCATTGATTTGG
CCTACATTTATGGAAATGGGTGGACACGTTATTGCACTTCCATTATTTATGGAAACATTTGCGTTCTTCTTTGAAGCTAT
TTTCTTAAGTATATATTTATATACTTGGGATCGTTTTAAAAATAAATGGACACATTTCTTAATTAGTATACCAGTAATTA
TTGGTGGCTCTTTCTCAGCATTCTTCATTACTTCAGTGAATTCATTTATGAATACGCCTGCAGGTTTTGAGTTGAAGAAT
GGAAAGATGGTCAATGTTCAACCTATAGAAGCGATGTTTAACCCATCGTTTATAGTTCGATCATTTCACGTAATTACTAC
AGCCGGTATGACGATGGCATTTGTTATTGCATCAATAGCAGCTTTTAAATTATTGCGTAATCGTCAACCTAAGGATACTG
TCTACCATAAGAAAGCTTTGAAAATGTCTATGATTGTTGGATTCTTTTCAACTTTACTTTCTATGTTGGCAGGGGATTTA
TCTGCAAAATTTTTGCATAAATTCCAACCTGAAAAATTAGCAGCTTATGAATGGCATTTCGATACATCTTCCCATGCCAA
ATTATTATTATTTGGTGTGTTAGATGAAAAGACTCAGCAAGTTAAAGGTGCGATTGAATTACCTGGACTATTGAGTTTCT
TAGCAGATAATAGTTTCAAAACTAAAGTGCAAGGGTTAAATGATTTTCCAAAAAGTTTACATCCGCCAATGATCGTCCAT
TATTTCTTTGATTTAATGGTAACGATGGGAATTTTATGTTTTGTCATTTCAGGTGTTTATGTCTTAACTTTAATGTTTAA
AAAGCTTAGAAAGTTTTCTACTCATAAATGGATGCTTTACGGAATATTATTAACAGGACCAGCTTCAATGCTAGCTATAG
AATTTGGATGGTTCTTAACAGAGATGGGTAGACAGCCTTGGATTGTTCGTGGTTATATGCGCGTGGCAGAAGCAGCAACA
CAAGCAGGCGGAATAACCTTCGTTACAATTTTATTTGGCATATTGTACATCATTTTAATGTATACATGTGCATACGTATT
AATTCGTATGTTTAAAAATAAACCGGCGTATGAAGATGTAAATCGTTTAGCCAAGAAGCAAGGAGGAGAAATAGAAAAAT
GA

Upstream 100 bases:

>100_bases
CACAATTTCATAGTGCATAATGTTTTAAAAATACACATTATAGCAATTATAATTAAGTTCATTGTGTTGTCATCAAAAAA
GAAAAAGGTGATGTTTTTAA

Downstream 100 bases:

>100_bases
TTTATGCATTTATAGGTATAACAGTGTTATGGTTGTTTTTATTTTGCTATATCATTATTGCTTCTATAGATTTTGGGGCA
GGTTTCTTCGCATTGCATTC

Product: cytochrome d ubiquinol oxidase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIW
PTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKN
GKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSFKTKVQGLNDFPKSLHPPMIVH
YFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAAT
QAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK

Sequences:

>Translated_453_residues
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIW
PTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKN
GKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSFKTKVQGLNDFPKSLHPPMIVH
YFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAAT
QAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
>Mature_453_residues
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIW
PTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKN
GKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSFKTKVQGLNDFPKSLHPPMIVH
YFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAAT
QAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=312, Percent_Identity=30.1282051282051, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787212, Length=318, Percent_Identity=28.6163522012579, Blast_Score=135, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 51195; Mature: 51195

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE
TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
HHHHHHHEEEHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCEEEEEEHHHHHHCCHHHHH
SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSFK
HHHHHHHCCCCHHEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHH
TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
HHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
EEEHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTI
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEE
TVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFK
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVR
HHHHHHHEEEHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCEEEEEEHHHHHHCCHHHHH
SFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSFK
HHHHHHHCCCCHHEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHH
TKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLY
HHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
GILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILM
EEEHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]