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The map label for this gene is ythB [H]

Identifier: 82750697

GI number: 82750697

Start: 1033672

End: 1034691

Strand: Direct

Name: ythB [H]

Synonym: SAB0953

Alternate gene names: 82750697

Gene position: 1033672-1034691 (Clockwise)

Preceding gene: 82750696

Following gene: 82750698

Centisome position: 37.69

GC content: 30.29

Gene sequence:

>1020_bases
ATGATTTATGCATTTATAGGTATAACAGTGTTATGGTTGTTTTTATTTTGCTATATCATTATTGCTTCTATAGATTTTGG
GGCAGGTTTCTTCGCATTGCATTCAAAGTTAACTGGTGATGAAAAGAAAATTAATCACTTAATTTCACGTTATTTAAACC
CTGTTTGGGAAGTTACGAATGTATTCTTTGTTTTCTTCTTCGTAGGATTCGTAGGTTTCTTTCCAGAGTCAATCAAATAT
TTAGGCACGGTATTGTTAATACCAGGTTCAATAGCACTGATTATGATATCGTTGAGAAACAGTTTTTATGCATTTGAAAA
TTATGGTCAAGATACAAAATTAGCATGGATGATCATGTATGGGGTAAGTGGATTATTAATTCCAGCTTCATTATCAACTG
CTTTAACTATTACGGAAGGTGGTTATATTAATGTTCGAAACAATGTTATCGATCTAGATTGGGTGCAGTTACTATTAAGC
CCATTTGCTTGGTCTGTAGTATTCTTGGCAATTATTTCAGTTTTATATATTTCATCAGGATTTTTGACATATTATGCTAA
AAAAGCAAATGACGAACCTGCATATAATTTAACAAGACAATGGCACATATTTTTAGGGCCACCGATGATTATCATTTGTT
TATTCGTATTTCTATCATTACGCATTCAAAATTCTGAACATTTTTATTCAGCTGTTTTTGACTACTGGTGGATGTTTGCT
ATAAGTTTCTTATTCTTTGCATTAGCTTCATTGTTAACATTCTTTAAGAAAAAACATGGTTTGGCTTTTGTATTTGTTAT
TTTACAAATGATGTTCGCGTTCTTTGGATATGGAATTAGTAAATTGCCATACCTTTTATATCCGTTTGTAAAAATTACAG
ATGCATATGTTAATCCAGAAATGGGCTGGACATTAGTTATTGTCTTTATTTTAGGTTTACTTTTATTACTTCCATCGTTA
ATATTATTATTAAGATTATTTGTTTTCGACAAAGAATATGTTGAAGGAAAGAAATCATAA

Upstream 100 bases:

>100_bases
TGTATACATGTGCATACGTATTAATTCGTATGTTTAAAAATAAACCGGCGTATGAAGATGTAAATCGTTTAGCCAAGAAG
CAAGGAGGAGAAATAGAAAA

Downstream 100 bases:

>100_bases
GTTGAGACGATACCCCAACTTTCATTTACTTGCATTACTGCATTTAGATAATTTAGTTGGGGTACTCATTTATAATAATT
TTAAATTTATATTTTCAATG

Product: cytochrome d ubiquinol oxidase subunit II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKY
LGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFA
ISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSL
ILLLRLFVFDKEYVEGKKS

Sequences:

>Translated_339_residues
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKY
LGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFA
ISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSL
ILLLRLFVFDKEYVEGKKS
>Mature_339_residues
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKY
LGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLS
PFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFA
ISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSL
ILLLRLFVFDKEYVEGKKS

Specific function: Unknown

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 38961; Mature: 38961

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTN
CEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSG
CCCCCEEECCCCEEEEEECCCEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFA
HHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCC
MGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTN
CEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSG
CCCCCEEECCCCEEEEEECCCEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFA
HHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCC
MGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]