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The map label for this gene is yebC [C]

Identifier: 82703835

GI number: 82703835

Start: 3121706

End: 3122428

Strand: Reverse

Name: yebC [C]

Synonym: Nmul_A2722

Alternate gene names: 82703835

Gene position: 3122428-3121706 (Counterclockwise)

Preceding gene: 82703836

Following gene: 82703834

Centisome position: 98.06

GC content: 55.19

Gene sequence:

>723_bases
ATGGCTGGTCACAGCAAGTGGGCTAATATCAAGCATAAGAAAGCCGCGCAGGATGCGAAGCGCGGCAAGATTTTCACCCG
TCTCATCAAGGAAATTACCGTTGCCGCGAGACTCGGCGGCGGGGATCCGAACAGCAATCCGCGGTTGCGTCTGGCTGTCG
ACAAGGCTTATGAGCAGAACATGCCCAAGGAAAACGTCGAGCGCGCGATCAAGCGCGGCAGTGGCGATCTGGAGGGCGTG
AATTACGAAGAAATACGTTACGAAGGTTACGGCATTGCCGGTGCGGCTGTGCTGGTCGATTGCATGACCGACAATCGAGT
GCGTACCGTGGCGGACGTGCGTCACGCTTTTACCAAATACGGCGGTAACCTTGGCACGGACGGTTCGGTTGGTTTTCTTT
TCAAGCACTGTGGCCAGTTGCTGTTTGCGCCGGGCACGGATGAAGACAAACTGATGGAAGTAGCCCTGGAAGCCGGCGCC
GAGGACATTATCGCCCATGATGATGGCAGCATCGAAGTCATCACCGCGCCGTACGAATTTGTCGCGGTGAAGGAAGCGCT
GGAAAAAGCAGGGTTCAAGGCGGAACTCGCCGAAGTGACCATGAAGCCCGTCAATGAAACCGAATTGACCGGGGACGATT
CGGTAAAAATGCAAAAGCTGCTCGATGCTTTGGAAAGCATCGACGATGTACAGGAAGTCTATACAACCGCGGTGATCGAC
TGA

Upstream 100 bases:

>100_bases
TCCTTGTCGGCTTTATGCTGGAGACGGGGGGTGATAACATTGCACCACTTCAGCAAAGGACTCACCCAAGGACTCAATAA
GGAACTCAGGGCATAGAATT

Downstream 100 bases:

>100_bases
GCAGGGGTTTTCCGCCCGGAAAATAAAAGGCAATAAAATCCGTATACTAGGTATAGACCCAGGTCTGCGGCTAACCGGTT
TTGGAATCATCGACAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGSGDLEGV
NYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGA
EDIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID

Sequences:

>Translated_240_residues
MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGSGDLEGV
NYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGA
EDIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID
>Mature_239_residues
AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGSGDLEGVN
YEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAE
DIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=26.7489711934156, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI1788171, Length=234, Percent_Identity=58.1196581196581, Blast_Score=283, Evalue=5e-78,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=37.1794871794872, Blast_Score=141, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=252, Percent_Identity=25.7936507936508, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=35.2272727272727, Blast_Score=122, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24583305, Length=245, Percent_Identity=28.9795918367347, Blast_Score=101, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2722_NITMU (Q2Y5G2)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_413401.1
- ProteinModelPortal:   Q2Y5G2
- SMR:   Q2Y5G2
- STRING:   Q2Y5G2
- GeneID:   3785887
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A2722
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q2Y5G2
- ProtClustDB:   PRK00110
- BioCyc:   NMUL323848:NMUL_A2722-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26147; Mature: 26016

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHC
MPKENVERAIKRGSGDLEGVNYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKY
CCHHHHHHHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPYEF
CCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHEEECCCCCEEEEECCHHH
VAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHC
MPKENVERAIKRGSGDLEGVNYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKY
CCHHHHHHHHHCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPYEF
CCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHEEECCCCCEEEEECCHHH
VAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA