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The map label for this gene is rodZ [H]

Identifier: 82703493

GI number: 82703493

Start: 2705002

End: 2706348

Strand: Reverse

Name: rodZ [H]

Synonym: Nmul_A2378

Alternate gene names: 82703493

Gene position: 2706348-2705002 (Counterclockwise)

Preceding gene: 82703494

Following gene: 82703492

Centisome position: 84.99

GC content: 60.28

Gene sequence:

>1347_bases
ATGGAAGCTCCTGAAAGTAGCGACATCGAGCAGCATGAGGAACCAAAAAAAACCGGAGAGCAGGTCGGCCAGGTGCTGCG
CGCTGCGCGGCTGGAACGCGGCCTGGATATTGAGGACGTTGCGCGCCAGTTACGCTTTGCAGCCCGGCAGGTGACGGCAC
TCGAAGAGGATGAATACGATAAGCTTGCGGGCGGCCCCTTCCTGCGCGGATTCGTGCGCAACTATGCCAAATTGCTGCAA
CTGGATGAAGCGCCGTTATTGAAGTTGCTTGAACAGTCGGTTCCTCCTCCGACGACGCACGTGGGGCGGCCTCCAAGTGA
GGAGATTCCCTTTCCCTCCGGGCAGGAGTATCTGAAACGCAACGTGGTCCTCGGCGGAGGAATTGTCCTGGCCATCACTC
TGCTGGGGTACGCGATCTATAGTGGTGACAAGGCTTCCGTTGCCAATCAGCCCGACATGGCAATGGAATCGGAGAAAGAC
ACCGGGCAACCGACTCTTTCATTCCCGTTTCCATCGCAGGCGCCCCCAGCGGAAGTGCCGGAATCTCAGGCTCCCGCACC
TTCCGCGCTTGTTCCCGATATGGCTTCCCAGCGAGAGCCGGGTATTGCCGCCCTCGAGGAGACAGCACCTTCCGCGGATA
CAGGCAGAGAGCAGGACACCGTGGCGTCCGCTCCTAAAGACGCGGCCGCTGGGAGCGGTGCCGAAGCTTCCGCTGGAGAG
CCTCTCACCCTGCCTCTTGCGCCGCCACCGGCGGTCCAGACCGCTCCCACAGCACCGGCAGTTCCAGGGGGGGAGCCCGC
CAATGTCCCAGTGGCTCCGAAGCCGCCCCAGGTTACAGTTGCTCCAAAGCCATCTGAGGGCCCAGTTACTTCGAAGCCAT
CTGGGAGCGCAGTTACCCCGAAGCCGCCTCAGGTCGCAGTTGCTCCGAAGCCACTTGAGGGCCCAGTTACTTCGCAGCCA
TCTGAGAGCGCAGTTACTTCGAAGCCGCCTCAGGTCGCAGTTGCTCCGAAGCCATCTGAGGGCGCAGCTACTTCGAAGCC
ATCTGAGAGCGCAGTTACCCCGAAGCCGCCCCAGGTCGCCGCTACTCCGAAGCCACCTCCTGCAAAAGCTGGAATTCGTC
TGACGTTTGCCGGCGAGTCATGGGTGCAAGTCAAGGATGGCAACGGGAAATTGCTTCTCTCAAGAGTCAATCCTCCTGGC
AGCGAGCAGGTGCTGCGTGGTAAGCCGCCCTATTCTCTCATGATCGGAAACCCGGGGCAGGTCAAGCTTGTCTACAATAG
CAAACCAGTCGATCTCTCGATTTTCGCCAAACTTCCCGGTGGAATGGCACATCTCGTGCTCCAATAG

Upstream 100 bases:

>100_bases
TGGGGCGTATTTTCCCGGTCGGCAACTGCACCTGAAGGCGTGAAGGCGTAAAAGCGATTGCGGATATGAAGCGTCAGGTA
ACATGAGATGGGGTGAGGGA

Downstream 100 bases:

>100_bases
ATTTCAATTTCAACACGACATCTCATATTCATCATGTCTATGGTTCAAAGTGCTTTTCCCCCACGCCGGAACAGCGTGGG
CGTTCAGGTAGGTTCGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MEAPESSDIEQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYDKLAGGPFLRGFVRNYAKLLQ
LDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKRNVVLGGGIVLAITLLGYAIYSGDKASVANQPDMAMESEKD
TGQPTLSFPFPSQAPPAEVPESQAPAPSALVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGE
PLTLPLAPPPAVQTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTPKPPQVAVAPKPLEGPVTSQP
SESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVAATPKPPPAKAGIRLTFAGESWVQVKDGNGKLLLSRVNPPG
SEQVLRGKPPYSLMIGNPGQVKLVYNSKPVDLSIFAKLPGGMAHLVLQ

Sequences:

>Translated_448_residues
MEAPESSDIEQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYDKLAGGPFLRGFVRNYAKLLQ
LDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKRNVVLGGGIVLAITLLGYAIYSGDKASVANQPDMAMESEKD
TGQPTLSFPFPSQAPPAEVPESQAPAPSALVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGE
PLTLPLAPPPAVQTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTPKPPQVAVAPKPLEGPVTSQP
SESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVAATPKPPPAKAGIRLTFAGESWVQVKDGNGKLLLSRVNPPG
SEQVLRGKPPYSLMIGNPGQVKLVYNSKPVDLSIFAKLPGGMAHLVLQ
>Mature_448_residues
MEAPESSDIEQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYDKLAGGPFLRGFVRNYAKLLQ
LDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKRNVVLGGGIVLAITLLGYAIYSGDKASVANQPDMAMESEKD
TGQPTLSFPFPSQAPPAEVPESQAPAPSALVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGE
PLTLPLAPPPAVQTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTPKPPQVAVAPKPLEGPVTSQP
SESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVAATPKPPPAKAGIRLTFAGESWVQVKDGNGKLLLSRVNPPG
SEQVLRGKPPYSLMIGNPGQVKLVYNSKPVDLSIFAKLPGGMAHLVLQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 46415; Mature: 46415

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAPESSDIEQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
KLAGGPFLRGFVRNYAKLLQLDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKR
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
NVVLGGGIVLAITLLGYAIYSGDKASVANQPDMAMESEKDTGQPTLSFPFPSQAPPAEVP
CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCC
ESQAPAPSALVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGE
CCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCC
PLTLPLAPPPAVQTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTP
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
KPPQVAVAPKPLEGPVTSQPSESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVA
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
ATPKPPPAKAGIRLTFAGESWVQVKDGNGKLLLSRVNPPGSEQVLRGKPPYSLMIGNPGQ
CCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCE
VKLVYNSKPVDLSIFAKLPGGMAHLVLQ
EEEEECCCCCCEEEEEECCCCCEEEEEC
>Mature Secondary Structure
MEAPESSDIEQHEEPKKTGEQVGQVLRAARLERGLDIEDVARQLRFAARQVTALEEDEYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHH
KLAGGPFLRGFVRNYAKLLQLDEAPLLKLLEQSVPPPTTHVGRPPSEEIPFPSGQEYLKR
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
NVVLGGGIVLAITLLGYAIYSGDKASVANQPDMAMESEKDTGQPTLSFPFPSQAPPAEVP
CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCC
ESQAPAPSALVPDMASQREPGIAALEETAPSADTGREQDTVASAPKDAAAGSGAEASAGE
CCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCC
PLTLPLAPPPAVQTAPTAPAVPGGEPANVPVAPKPPQVTVAPKPSEGPVTSKPSGSAVTP
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
KPPQVAVAPKPLEGPVTSQPSESAVTSKPPQVAVAPKPSEGAATSKPSESAVTPKPPQVA
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
ATPKPPPAKAGIRLTFAGESWVQVKDGNGKLLLSRVNPPGSEQVLRGKPPYSLMIGNPGQ
CCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCE
VKLVYNSKPVDLSIFAKLPGGMAHLVLQ
EEEEECCCCCCEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA