Click here to switch to the map view.

The map label for this gene is ychJ [C]

Identifier: 82702235

GI number: 82702235

Start: 1274663

End: 1275115

Strand: Reverse

Name: ychJ [C]

Synonym: Nmul_A1106

Alternate gene names: 82702235

Gene position: 1275115-1274663 (Counterclockwise)

Preceding gene: 82702236

Following gene: 82702234

Centisome position: 40.04

GC content: 53.86

Gene sequence:

>453_bases
ATGAATGCAAAAACGACGTCCTGTCCGTGCGGTTACACGGAGATAACAGCGAGACCAGCGGGAACTCGGCAGGCTCGTCC
TTCCGCGAATAGCGGCAAAAAGTATGCTGACTGCTGCGGCCGCTACCTGGATGACGGCGAAACAGTTCCCACAGCGGAAG
CATTGATGCGTTCGCGCTATACTGCATACGCCCTCGGTCGTGAAGAATACCTGCTGGCGACCTGGAATCAAGACACGCGC
CCAGCATCACTTGGATTGGAAAATAAACAGCATGAAAAATGGCTGGGACTGGAAGTGAAACTTCATGAACAGCCAGGGCC
GGATCACGCCATGGTGGAATTCGTGGCACGTTACAAGGTGGATGGGCGCGCGCACCGTTTGCATGAAATCAGCCGCTTCG
TGCGTAAGAACGGGCAATGGTTCTATGTGGACGGCGATATTATAAGATCTTGA

Upstream 100 bases:

>100_bases
ACAGGCATGATCGTTGCTCCCAAGTTTATTGTTCCACATGCACCCGATCATGATCATGGAAAATTGAAGTTTCCATTTTA
AGTCTTTATGACAAGTTTAT

Downstream 100 bases:

>100_bases
GGCTTAAAAATGATATCGCGTACCTGGAACACCGAGCGGTTATTTCCCCGTGGAATATCCGGACGCTACAAAATTTCGAA
CGCCAGGCCCCATATTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNAKTTSCPCGYTEITARPAGTRQARPSANSGKKYADCCGRYLDDGETVPTAEALMRSRYTAYALGREEYLLATWNQDTR
PASLGLENKQHEKWLGLEVKLHEQPGPDHAMVEFVARYKVDGRAHRLHEISRFVRKNGQWFYVDGDIIRS

Sequences:

>Translated_150_residues
MNAKTTSCPCGYTEITARPAGTRQARPSANSGKKYADCCGRYLDDGETVPTAEALMRSRYTAYALGREEYLLATWNQDTR
PASLGLENKQHEKWLGLEVKLHEQPGPDHAMVEFVARYKVDGRAHRLHEISRFVRKNGQWFYVDGDIIRS
>Mature_150_residues
MNAKTTSCPCGYTEITARPAGTRQARPSANSGKKYADCCGRYLDDGETVPTAEALMRSRYTAYALGREEYLLATWNQDTR
PASLGLENKQHEKWLGLEVKLHEQPGPDHAMVEFVARYKVDGRAHRLHEISRFVRKNGQWFYVDGDIIRS

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=121, Percent_Identity=38.0165289256198, Blast_Score=86, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17022; Mature: 17022

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKTTSCPCGYTEITARPAGTRQARPSANSGKKYADCCGRYLDDGETVPTAEALMRSRY
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCH
TAYALGREEYLLATWNQDTRPASLGLENKQHEKWLGLEVKLHEQPGPDHAMVEFVARYKV
HHEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHCC
DGRAHRLHEISRFVRKNGQWFYVDGDIIRS
CCHHHHHHHHHHHHHCCCCEEEECCCEECC
>Mature Secondary Structure
MNAKTTSCPCGYTEITARPAGTRQARPSANSGKKYADCCGRYLDDGETVPTAEALMRSRY
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCH
TAYALGREEYLLATWNQDTRPASLGLENKQHEKWLGLEVKLHEQPGPDHAMVEFVARYKV
HHEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHCC
DGRAHRLHEISRFVRKNGQWFYVDGDIIRS
CCHHHHHHHHHHHHHCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA