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The map label for this gene is rdoA [H]

Identifier: 82702236

GI number: 82702236

Start: 1275224

End: 1276213

Strand: Reverse

Name: rdoA [H]

Synonym: Nmul_A1107

Alternate gene names: 82702236

Gene position: 1276213-1275224 (Counterclockwise)

Preceding gene: 82702237

Following gene: 82702235

Centisome position: 40.08

GC content: 55.15

Gene sequence:

>990_bases
GTGGGAACAGCAGATAATTCGGCTCCAAATGATTTCTCCACGCTTTCTCCTGAACGCGTGTTGCATGCTTTGGAAAGCTT
GGGTTTCCACAGCGATGGACGGCTGCTGGCACTCAACAGCTACGAGAACCGCGTCTACCAAATCGGCCTCGAAAACGGTG
CGCCAGTCATAGCAAAATTCTACCGCCCGGAACGCTGGACGAACAACGCCATTCTCGAGGAACACGCGTTCGTGCGGGAA
CTGGCCGAGCACGAAATTCCTGTAGTACCCCCATTGGTGCTGCAAGGAATATCGCTGCATTATTTTGAGGGATTTCGTTT
CACTGTTTTTCCAAGGCATGGTGGTCGCGCGCCCGAACTGGAAGATCCCCATACCCTGGAATGGATGGGGCGCTTCCTAG
GACGTATCCATGCGGTTGGCGCACTGAATCCCTTTCTTGAACGCCCGGAATTGAATATCGCCAACTTCGGCGAACAACCC
CGCGACTATCTGTTGGCACATGGATTCGTTCCGCCTGATATTGAGGCTGCCTATCGCAGTGCCGTGAATCAGGCGTTAGA
CAGTGCACGGCACTGTTTTGGACGCGCAGGTAAAGTACGCGCGTTACGCCTGCACGGGGACTGTCATGCAGGCAATGTTT
TGTGGACTGACGATGGACCGCACTTCGTCGATTTTGACGACAGCCGCATGGGACCAGCAGTACAGGACTTGTGGATGCTG
TTATCCGGCGAACGGGCCGACATGAGGAAGCAGTTGGACAGCGTGCTGGCCGGGTATGAAAACTTCTTCGATTTCGACGA
AAGGGAATTGCATCTGGTCGAGGCGTTACGCACTCTGCGCTTGATCCACTACGCGGCGTGGCTTGCACAGCGATGGGACG
ACCCTGCTTTCAAGCGAGCGTTTCCCTGGTTCAACACCCAACGCTACTGGCAGGATCGCATTCTCGAATTGCGGGAGCAG
ATCGCCCTTATGGATGAACCGCCGCTATGA

Upstream 100 bases:

>100_bases
GCCGGGGTGATTTATCGGATCAGCTACAGGAAACCTTGAGCAGGCAATGCAAAACGAGCGCAACCAACAATTCCGGGCAG
CCTTCATTTGAGTGACCGGT

Downstream 100 bases:

>100_bases
CAGGATTTACAGGCATGATCGTTGCTCCCAAGTTTATTGTTCCACATGCACCCGATCATGATCATGGAAAATTGAAGTTT
CCATTTTAAGTCTTTATGAC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MGTADNSAPNDFSTLSPERVLHALESLGFHSDGRLLALNSYENRVYQIGLENGAPVIAKFYRPERWTNNAILEEHAFVRE
LAEHEIPVVPPLVLQGISLHYFEGFRFTVFPRHGGRAPELEDPHTLEWMGRFLGRIHAVGALNPFLERPELNIANFGEQP
RDYLLAHGFVPPDIEAAYRSAVNQALDSARHCFGRAGKVRALRLHGDCHAGNVLWTDDGPHFVDFDDSRMGPAVQDLWML
LSGERADMRKQLDSVLAGYENFFDFDERELHLVEALRTLRLIHYAAWLAQRWDDPAFKRAFPWFNTQRYWQDRILELREQ
IALMDEPPL

Sequences:

>Translated_329_residues
MGTADNSAPNDFSTLSPERVLHALESLGFHSDGRLLALNSYENRVYQIGLENGAPVIAKFYRPERWTNNAILEEHAFVRE
LAEHEIPVVPPLVLQGISLHYFEGFRFTVFPRHGGRAPELEDPHTLEWMGRFLGRIHAVGALNPFLERPELNIANFGEQP
RDYLLAHGFVPPDIEAAYRSAVNQALDSARHCFGRAGKVRALRLHGDCHAGNVLWTDDGPHFVDFDDSRMGPAVQDLWML
LSGERADMRKQLDSVLAGYENFFDFDERELHLVEALRTLRLIHYAAWLAQRWDDPAFKRAFPWFNTQRYWQDRILELREQ
IALMDEPPL
>Mature_328_residues
GTADNSAPNDFSTLSPERVLHALESLGFHSDGRLLALNSYENRVYQIGLENGAPVIAKFYRPERWTNNAILEEHAFVREL
AEHEIPVVPPLVLQGISLHYFEGFRFTVFPRHGGRAPELEDPHTLEWMGRFLGRIHAVGALNPFLERPELNIANFGEQPR
DYLLAHGFVPPDIEAAYRSAVNQALDSARHCFGRAGKVRALRLHGDCHAGNVLWTDDGPHFVDFDDSRMGPAVQDLWMLL
SGERADMRKQLDSVLAGYENFFDFDERELHLVEALRTLRLIHYAAWLAQRWDDPAFKRAFPWFNTQRYWQDRILELREQI
ALMDEPPL

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=324, Percent_Identity=43.8271604938272, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 37807; Mature: 37676

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTADNSAPNDFSTLSPERVLHALESLGFHSDGRLLALNSYENRVYQIGLENGAPVIAKF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHH
YRPERWTNNAILEEHAFVRELAEHEIPVVPPLVLQGISLHYFEGFRFTVFPRHGGRAPEL
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCEEEEEEECCCCCCCCC
EDPHTLEWMGRFLGRIHAVGALNPFLERPELNIANFGEQPRDYLLAHGFVPPDIEAAYRS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHCCCCCCCCHHHHHHH
AVNQALDSARHCFGRAGKVRALRLHGDCHAGNVLWTDDGPHFVDFDDSRMGPAVQDLWML
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHH
LSGERADMRKQLDSVLAGYENFFDFDERELHLVEALRTLRLIHYAAWLAQRWDDPAFKRA
HCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FPWFNTQRYWQDRILELREQIALMDEPPL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GTADNSAPNDFSTLSPERVLHALESLGFHSDGRLLALNSYENRVYQIGLENGAPVIAKF
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHH
YRPERWTNNAILEEHAFVRELAEHEIPVVPPLVLQGISLHYFEGFRFTVFPRHGGRAPEL
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCEEEEEEECCCCCCCCC
EDPHTLEWMGRFLGRIHAVGALNPFLERPELNIANFGEQPRDYLLAHGFVPPDIEAAYRS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHCCCCCCCCHHHHHHH
AVNQALDSARHCFGRAGKVRALRLHGDCHAGNVLWTDDGPHFVDFDDSRMGPAVQDLWML
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHH
LSGERADMRKQLDSVLAGYENFFDFDERELHLVEALRTLRLIHYAAWLAQRWDDPAFKRA
HCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FPWFNTQRYWQDRILELREQIALMDEPPL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA