Definition Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession NC_007614
Length 3,184,243

Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 82702126

GI number: 82702126

Start: 1156868

End: 1157716

Strand: Reverse

Name: ydiA [C]

Synonym: Nmul_A0997

Alternate gene names: 82702126

Gene position: 1157716-1156868 (Counterclockwise)

Preceding gene: 82702129

Following gene: 82702125

Centisome position: 36.36

GC content: 53.36

Gene sequence:

>849_bases
ATGCCGATCATGCCGATTACCCCCAAACCGATTCGTCGAACTGCCTTCTTTCTTTCAGACCGTACCGGGATTACGGTGGA
AATGCTGGGGCATAGCCTGCTCAGTCAATTCGAAAATATTCCCCTGGATGAGATCACCCTACCCTATATTGACAGCAAGG
CAAAAGCTACTTCGGCCGTCCGGACGATCAATGAGCGGTACATCGCGGACGAGGCCCGCCCGCTGGTGTTCAGTACGTTG
GTGAATCCCGAAATCAGGCTTATCATCAATTCTGCCGACGCTCTGCATCTCGATTGCTTCAGCATTTTTATTGCTCCACT
GGAAGCTGAGCTGGGTGCGCGTTCGTCGGAAAACATGGGGCGTTCTCATCGCGTTTCCGATCCAACGGGGTACTGGAAGC
GTATCAACGCAATAAATTACGCTCTGGAGCACGACGATGGCTTGTCGCAAAAAAACTGGAACCGGGCCGATGTTACCCTG
GTAGGCGCTTCCCGTACCGGCAAGACCCCGACTTGTCTCTATCTCGCCTTGCAATATGGAATTTACGCGGCAAACTACCC
GCTTATTCCCGAGGATTTCCAGCGCGAAGAGCTTCCTGCCCAGATCAGGAATATACGAAGCAAGTTGTTCGGCTTTACCA
TTCACCCGGAGCGGCTCCATGAAATACGCAGCGAACGCAAGCCGGAAAGCGTGTACGCTTCCCTCAAGAACTGCGAGTAT
GAAGTGCAGAGCGCGGAAAAGCTGATGCGCCGCGCGGGCATCCCCTATCTCGACGCAACCAGCAAATCCATCGAAGAATT
GGCGACCGCGGTACTGCACGAAGCAAAACTCGAACGGAAGATTTATTAG

Upstream 100 bases:

>100_bases
CATTTTGACTCCTGATTGTGCAAATACTGGCCAAAGAAGAATTGTGCTACATTTTGAAGCGGAATTTCCACCCGGAAATC
ATCGATAGTTTCTCATAATC

Downstream 100 bases:

>100_bases
CCGGAGAAGCCGTAAGAGAGGACCCGGCAGCACAAGTCCATATTTTCATTAATTTACCCCTACGGTATGAAACCCGAAAG
GCCTGTTTGGGAGATGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MPIMPITPKPIRRTAFFLSDRTGITVEMLGHSLLSQFENIPLDEITLPYIDSKAKATSAVRTINERYIADEARPLVFSTL
VNPEIRLIINSADALHLDCFSIFIAPLEAELGARSSENMGRSHRVSDPTGYWKRINAINYALEHDDGLSQKNWNRADVTL
VGASRTGKTPTCLYLALQYGIYAANYPLIPEDFQREELPAQIRNIRSKLFGFTIHPERLHEIRSERKPESVYASLKNCEY
EVQSAEKLMRRAGIPYLDATSKSIEELATAVLHEAKLERKIY

Sequences:

>Translated_282_residues
MPIMPITPKPIRRTAFFLSDRTGITVEMLGHSLLSQFENIPLDEITLPYIDSKAKATSAVRTINERYIADEARPLVFSTL
VNPEIRLIINSADALHLDCFSIFIAPLEAELGARSSENMGRSHRVSDPTGYWKRINAINYALEHDDGLSQKNWNRADVTL
VGASRTGKTPTCLYLALQYGIYAANYPLIPEDFQREELPAQIRNIRSKLFGFTIHPERLHEIRSERKPESVYASLKNCEY
EVQSAEKLMRRAGIPYLDATSKSIEELATAVLHEAKLERKIY
>Mature_281_residues
PIMPITPKPIRRTAFFLSDRTGITVEMLGHSLLSQFENIPLDEITLPYIDSKAKATSAVRTINERYIADEARPLVFSTLV
NPEIRLIINSADALHLDCFSIFIAPLEAELGARSSENMGRSHRVSDPTGYWKRINAINYALEHDDGLSQKNWNRADVTLV
GASRTGKTPTCLYLALQYGIYAANYPLIPEDFQREELPAQIRNIRSKLFGFTIHPERLHEIRSERKPESVYASLKNCEYE
VQSAEKLMRRAGIPYLDATSKSIEELATAVLHEAKLERKIY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=274, Percent_Identity=43.0656934306569, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y997_NITMU (Q2YAC1)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411692.1
- STRING:   Q2YAC1
- GeneID:   3785827
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A0997
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   MERIEAV
- PhylomeDB:   Q2YAC1
- ProtClustDB:   PRK05339
- BioCyc:   NMUL323848:NMUL_A0997-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 31994; Mature: 31863

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIMPITPKPIRRTAFFLSDRTGITVEMLGHSLLSQFENIPLDEITLPYIDSKAKATSAV
CCCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHH
RTINERYIADEARPLVFSTLVNPEIRLIINSADALHLDCFSIFIAPLEAELGARSSENMG
HHHHHHHHHCCCCCCEEHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCC
RSHRVSDPTGYWKRINAINYALEHDDGLSQKNWNRADVTLVGASRTGKTPTCLYLALQYG
CCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHC
IYAANYPLIPEDFQREELPAQIRNIRSKLFGFTIHPERLHEIRSERKPESVYASLKNCEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCH
EVQSAEKLMRRAGIPYLDATSKSIEELATAVLHEAKLERKIY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIMPITPKPIRRTAFFLSDRTGITVEMLGHSLLSQFENIPLDEITLPYIDSKAKATSAV
CCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHH
RTINERYIADEARPLVFSTLVNPEIRLIINSADALHLDCFSIFIAPLEAELGARSSENMG
HHHHHHHHHCCCCCCEEHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCCCCC
RSHRVSDPTGYWKRINAINYALEHDDGLSQKNWNRADVTLVGASRTGKTPTCLYLALQYG
CCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHC
IYAANYPLIPEDFQREELPAQIRNIRSKLFGFTIHPERLHEIRSERKPESVYASLKNCEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCH
EVQSAEKLMRRAGIPYLDATSKSIEELATAVLHEAKLERKIY
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA